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0
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Recent extremes in Antarctic sea ice extent modulated by ocean heat ventilation.
(pnas.org)
|
Wilson EA
…
Campbell EC
PNAS
2026-04-07
|
#oceanography
#modeling
#thermodynamics
#stratification
|
|
0
|
|
Fast prediction of protein flexibility.
(academic.oup.com)
|
Praznikar J
Bioinformatics
2026-04-07
|
#modeling
#protein
#flexibility
#prediction
|
|
0
|
|
Species range shifts often speed ahead of their modeled climatic niches.
(pnas.org)
|
Oliveira BF
…
Comte L
PNAS
2026-04-07
|
#modeling
#climate
#biogeography
|
|
0
|
|
Molecular kinetics dictate population dynamics in CRISPR-based plasmid defense.
(pnas.org)
|
Richards L
…
Jones D
PNAS
2026-04-07
|
#crispr
#plasmid
#conjugation
#modeling
#immunity
|
|
0
|
|
Hypergraph representations of single-cell RNA sequencing data for improved cell clustering.
(academic.oup.com)
|
He W
…
Eliassi-Rad T
Bioinformatics
2026-04-07
|
#transcriptomics
#clustering
#sequencing
#modeling
|
|
0
|
|
Predicting antibody-antigen affinity with a dual-level representation model.
(academic.oup.com)
|
Wang Z
…
Xia N
Bioinformatics
2026-04-07
|
#modeling
#proteomics
#immunology
#sequencing
|
|
0
|
|
Evaluating deep learning based structure prediction methods on antibody-antigen complexes.
(academic.oup.com)
|
Fromm S
…
Elofsson A
Bioinformatics
2026-04-07
|
#structure prediction
#modeling
#antibody
#antigen
#deep learning
|
|
0
|
|
DrugBLIP: exploring the protein-molecule interaction mechanisms with a multi-task learning graph transformer.
(academic.oup.com)
|
Wang R
…
Zhao P
Bioinformatics
2026-04-07
|
#docking
#modeling
#screening
#binding
|
|
0
|
|
Predicting condition-aware drug-induced transcriptional responses via a latent diffusion model.
(academic.oup.com)
|
Kim C
…
Yoo S
Bioinformatics
2026-04-07
|
#transcriptomics
#modeling
#drug discovery
#generative
#precision medicine
|
|
0
|
|
ONEST: a web-based platform for the rapid and robust analysis of protein excited states through CEST spectroscopy.
(academic.oup.com)
|
Choi J
…
Lee D
Bioinformatics
2026-04-07
|
#nmr
#spectroscopy
#protein structure
#modeling
#conformational dynamics
|
|
0
|
|
Enhancing mutation impact prediction in protein-protein interactions through interpretable graph-based multi-level feature interactions.
(academic.oup.com)
|
Wu S
…
Feng W
Bioinformatics
2026-04-07
|
#mutation
#binding affinity
#modeling
#protein-protein interaction
|
|
0
|
|
High-fidelity bidirectional translation between single-cell transcriptomes and DNA methylomes with scBOND.
(genome.cshlp.org)
|
Lang K
…
Chen S
Genome Research
2026-04-07
|
#transcriptomics
#epigenetics
#single-cell
#modeling
|
|
0
|
|
Model evidence for distinct origins of glacial-interglacial and millennial signals in Greenland dust.
(pnas.org)
|
Hopcroft PO
…
Rousseau DD
PNAS
2026-04-07
|
#modeling
#paleoclimate
#dust
#abruptchange
|
|
0
|
|
Free information disrupts even Bayesian crowds.
(pnas.org)
|
Stein J
…
Testori M
PNAS
2026-04-07
|
#modeling
#information
#network
|
|
0
|
|
Separating selection from mutation in antibody language models.
(elifesciences.org)
|
Matsen FA 4th
…
Haddox HK
eLife
2026-04-07
|
#antibody
#mutation
#selection
#modeling
#immunity
|
|
0
|
|
Detecting directed motion and confinement in single-particle trajectories using hidden variables.
(elifesciences.org)
|
Simon F
…
Weiss LE
eLife
2026-04-07
|
#tracking
#modeling
#diffusion
|
|
0
|
|
Projected changes in tropical instability wave activity in the Pacific Ocean under greenhouse warming.
(pnas.org)
|
Xue A
…
Wang M
PNAS
2026-04-07
|
#modeling
#climate
#oceanography
|
|
0
|
|
How spatial patterns can lead to less resilient ecosystems.
(pnas.org)
|
Pinto-Ramos D
…
Martinez-Garcia R
PNAS
2026-04-07
|
#resilience
#modeling
#vegetation
#desertification
#stability
|
|
0
|
|
GRNFormer: accurate gene regulatory network inference using graph transformer.
(academic.oup.com)
|
Hegde A
…
Cheng J
Bioinformatics
2026-04-07
|
#gene regulation
#transcriptomics
#modeling
#single-cell
|
|
0
|
|
Mining cancer genomes for copy number alterations identifies glycosylation enzymes as oncogenic drivers.
(pnas.org)
|
Sahu P
…
Parashuraman S
PNAS
2026-04-07
|
#cancer
#oncogene
#genomics
#metabolism
#modeling
|
|
0
|
|
SA2E: spatial-aware auto-encoder for cell type deconvolution of spatial transcriptomics data.
(academic.oup.com)
|
Ma Y
…
Ma X
Bioinformatics
2026-04-07
|
#transcriptomics
#deconvolution
#cell-type
#modeling
|
|
0
|
|
Background selection in recombining genomes and its consequences for the maintenance of variation in complex traits.
(pnas.org)
|
Li X
…
Berg JJ
PNAS
2026-04-07
|
#modeling
#selection
#mutation
#epistasis
#polymorphism
|
|
0
|
|
Jamming as a topological satisfiability transition with contact number hyperuniformity and criticality.
(pnas.org)
|
Shang J
…
Zhang J
PNAS
2026-04-07
|
#jamming
#criticality
#hyperuniformity
#modeling
|
|
0
|
|
Descent from a common ancestor restricts exploration of protein sequence space.
(pnas.org)
|
Isakova LH
…
Kondrashov FA
PNAS
2026-04-07
|
#evolution
#phylogenomics
#protein
#modeling
#epistasis
|
|
0
|
|
Viral dynamics of the Respiratory Syncytial Virus during experimental human challenge: insights for transmission and protection.
(academic.oup.com)
|
Schumer C
…
Guedj J
Journal of Infectious Diseases
2026-04-07
|
#modeling
#immunity
#infection
#transmission
#virulence
|
|
0
|
|
Biomechanical anticoagulation by spherical platelets in extracorporeal systems.
(pnas.org)
|
Ji R
…
Chen H
PNAS
2026-04-07
|
#anticoagulation
#biomechanics
#hemodialysis
#platelets
#modeling
|
|
0
|
|
Non-ergodicity in ecology and evolution.
(pnas.org)
|
Kuosmanen T
…
Mustonen V
PNAS
2026-04-07
|
#modeling
#evolution
#stochasticity
#metapopulation
#fitness
|
|
0
|
|
Pretraining improves prediction of genomic datasets across species.
(academic.oup.com)
|
Huang F
…
Song JHT
Bioinformatics
2026-04-07
|
#modeling
#transcriptomics
#transfer learning
#chromatin
|
|
0
|
|
Dynamic switching of cell-substrate contact sites allows gliding diatoms to modulate the curvature of their paths.
(pnas.org)
|
Golfier S
…
Diez S
PNAS
2026-04-07
|
#motility
#modeling
#microscopy
#locomotion
|
|
0
|
|
Protein FID: improved evaluation of protein structure generative models.
(academic.oup.com)
|
Faltings F
…
Barzilay R
Bioinformatics
2026-04-07
|
#modeling
#proteomics
#protein
#evaluation
|
|
0
|
|
Fitting coarse-grained models to macroscopic experimental data via automatic differentiation.
(pnas.org)
|
Krueger RK
…
Brenner MP
PNAS
2026-04-07
|
#modeling
#molecular simulation
#optimization
#force field
|