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1
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Large-scale single-cell long-read genomics enables high-resolution microbiome profiling
(biorxiv.org)
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Mengzhen Li
…
Yifan Liu
openRxiv
2024-9-11
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#microbiome
#long-read
#single-cell
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1
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Ecology of the gut microbiome
(science.org)
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Erik Bakkeren
Science
2026-7-2
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#ecology
#amr
#microbiome
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1
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Our Bacteria Are Talking. We’ve Just Begun to Understand What They’re Saying.
(nytimes.com)
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#microbiome
#gut
#indigenous-knowledge
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0
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Microbial consortia mediating lignocellulose turnover and denitrification in eutrophic lake sediment enrichments.
(journals.asm.org)
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Schiml VC
…
Arntzen MO
mSystems
2026-06-29
|
#metagenomics
#denitrification
#lignocellulose
#microbiome
#metaproteomics
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0
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Trichoderma enriches Burkholderia via cross-feeding of degradation intermediates to enhance atrazine degradation and alleviate soybean phytotoxicity.
(academic.oup.com)
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Jiang H
…
Liu T
The ISME Journal
2026-06-29
|
#bioremediation
#biodegradation
#metagenomics
#microbiome
#phytotoxicity
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0
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Transcriptomics profiles in intestinal sulfide overproduction, small intestinal bacterial overgrowth, and intestinal methanogen overgrowth.
(journals.asm.org)
|
de Freitas Germano J
…
Pimentel M
mSystems
2026-06-29
|
#transcriptomics
#sibo
#microbiome
#dysbiosis
#gastrointestinal
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0
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MeLSI: Metric Learning for Statistical Inference in microbiome community composition analysis.
(journals.asm.org)
|
Bresette N
…
Lin A-L
mSystems
2026-06-29
|
#microbiome
#metagenomics
#machine learning
#beta-diversity
#statistical inference
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0
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Host life-history strategy is a critical determinant of virulent phage infection propensity.
(academic.oup.com)
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Wu C
…
Alvarez PJJ
The ISME Journal
2026-06-29
|
#phage
#virulence
#microbiome
#genomics
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0
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IL-17A deficiency in HLA-DR3 transgenic mice enriches beneficial Prevotella species in gut to promote Tregs and reduce CNS autoimmunity.
(link.springer.com)
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Shahi SK
…
Mangalam AK
Microbiome
2026-06-29
|
#microbiome
#autoimmunity
#immunity
#sclerosis
#tregs
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0
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Perinatal ampicillin exposure alters murine maternal fecal bile acid and acylcarnitine profiles.
(tandfonline.com)
|
Zuffa S
…
Tsunoda SM
Gut Microbes
2026-06-29
|
#microbiome
#metabolomics
#antibiotic
#perinatal
#immunity
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0
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Mobile genetic elements shape microbial diversity and functions in thawing permafrost soils.
(nature.com)
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Guo J
…
Bagby SC
Nature Microbiology
2026-06-29
|
#metagenomics
#permafrost
#mobilome
#microbiome
#metabolomics
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0
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Microbiome and metabolites impact enteric and central nervous systems in ALS.
(tandfonline.com)
|
Walton EI
…
Sun J
Gut Microbes
2026-06-29
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#microbiome
#neurodegeneration
#dysbiosis
#metabolomics
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0
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Epistatic interactions inform rational design of synthetic microbial communities for bioremediation.
(nature.com)
|
Yousef M
…
Kuehn S
Nature Microbiology
2026-06-29
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#microbiome
#bioremediation
#epistasis
#consortia
#toxicology
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0
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Scalable enumeration and sampling of minimal metabolic pathways for organisms and communities.
(linkinghub.elsevier.com)
|
Oyas O
…
Stelling J
Cell Systems
2026-06-29
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#metabolism
#pathways
#microbiome
#modeling
#consortia
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0
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Bifidobacterium animalis reshapes the bile acid pool and prevents neonatal jaundice: a clinical microbiome study from correlation to causation.
(nature.com)
|
Chen X
…
Zeng S
npj Biofilms and Microbiomes
2026-06-29
|
#metagenomics
#microbiome
#jaundice
#metabolism
#dysbiosis
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0
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Targeted genomic editing of human gut Bacteroides species based on CRISPR-associated transposases.
(linkinghub.elsevier.com)
|
Hu Y
…
Dai L
Cell Systems
2026-06-29
|
#microbiome
#crispr
#genome editing
#bacteroides
#synthetic biology
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0
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Emergence of invasive Escherichia coli pathobionts in gut microbiome promotes cancer stemness via targeting Hippo pathways.
(tandfonline.com)
|
Yu LC
…
Ni YH
Gut Microbes
2026-06-30
|
#microbiome
#cancer
#dysbiosis
#stemness
#pathogenesis
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0
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Uncovering transcriptional processes in microbial communities adapted to differing saline conditions in salt-weathered historic buildings.
(link.springer.com)
|
Furnwein L
…
Graf AB
Microbiome
2026-06-30
|
#metatranscriptomics
#metagenomics
#biodeterioration
#microbiome
#acidophilic
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0
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Signatures in the gut microbiome of German elite athletes: insights from a matched-subgroup analysis.
(journals.asm.org)
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Lenz C
…
Kruger K
mSystems
2026-06-30
|
#microbiome
#metagenomics
#exercise
#taxonomy
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0
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Multi-omics analysis of saccharomyces boulardii supplementation reveals coordinated microbiome, metabolic, and immune signaling changes accompanying tumor suppression.
(tandfonline.com)
|
Vaaben TH
…
Sommer MOA
Gut Microbes
2026-06-30
|
#microbiome
#metabolomics
#cancer
#immunity
#probiotic
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