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1
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Rethinking metagenome-assembled genome completeness: are we truly recovering complete genomes?
(frontiersin.org)
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Thierry Alexandre Pellegrinetti
…
Edel Pérez-López
Frontiers in Microbiology
2026-7-6
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#metagenomics
#opinion
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0
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Microbial consortia mediating lignocellulose turnover and denitrification in eutrophic lake sediment enrichments.
(journals.asm.org)
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Schiml VC
…
Arntzen MO
mSystems
2026-06-29
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#metagenomics
#denitrification
#lignocellulose
#microbiome
#metaproteomics
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0
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Trichoderma enriches Burkholderia via cross-feeding of degradation intermediates to enhance atrazine degradation and alleviate soybean phytotoxicity.
(academic.oup.com)
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Jiang H
…
Liu T
The ISME Journal
2026-06-29
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#bioremediation
#biodegradation
#metagenomics
#microbiome
#phytotoxicity
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0
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Disentangling production and persistence of extracellular virions in grassland soils with SIP-viromics.
(journals.asm.org)
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Trubl G
…
Blazewicz SJ
mSystems
2026-06-29
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#viromics
#metagenomics
#virus
#soil
#isotope probing
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0
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MeLSI: Metric Learning for Statistical Inference in microbiome community composition analysis.
(journals.asm.org)
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Bresette N
…
Lin A-L
mSystems
2026-06-29
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#microbiome
#metagenomics
#machine learning
#beta-diversity
#statistical inference
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0
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Mobile genetic elements shape microbial diversity and functions in thawing permafrost soils.
(nature.com)
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Guo J
…
Bagby SC
Nature Microbiology
2026-06-29
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#metagenomics
#permafrost
#mobilome
#microbiome
#metabolomics
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0
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Bifidobacterium animalis reshapes the bile acid pool and prevents neonatal jaundice: a clinical microbiome study from correlation to causation.
(nature.com)
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Chen X
…
Zeng S
npj Biofilms and Microbiomes
2026-06-29
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#metagenomics
#microbiome
#jaundice
#metabolism
#dysbiosis
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0
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Uncovering transcriptional processes in microbial communities adapted to differing saline conditions in salt-weathered historic buildings.
(link.springer.com)
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Furnwein L
…
Graf AB
Microbiome
2026-06-30
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#metatranscriptomics
#metagenomics
#biodeterioration
#microbiome
#acidophilic
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0
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Signatures in the gut microbiome of German elite athletes: insights from a matched-subgroup analysis.
(journals.asm.org)
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Lenz C
…
Kruger K
mSystems
2026-06-30
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#microbiome
#metagenomics
#exercise
#taxonomy
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0
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Museomics reveals uncultured symbionts with biosynthetic potential in nudibranchs.
(link.springer.com)
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Porcel Sanchis D
…
Dzunkova M
Microbiome
2026-06-30
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#metagenomics
#symbiosis
#microbiome
#biosynthesis
#uncultured
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0
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Microbe-Metabolite Interactions in Cave Soils Synergistically Regulate the Environmental Persistence of Pseudogymnoascus destructans.
(sfamjournals.onlinelibrary.wiley.com)
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Wang D
…
Feng J
Environmental Microbiology
2026 Jul
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#metagenomics
#metabolomics
#microbiome
#pathogen
#antagonism
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0
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n-Alkane Gradients Reshape Soil Microbial Networks and Functions at Petroleum Refinery Sites.
(sfamjournals.onlinelibrary.wiley.com)
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Zhang Y
…
Zhang H
Environmental Microbiology
2026-07-01
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#metagenomics
#bioremediation
#microbiome
#hydrocarbon
#contamination
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0
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VirBinn improves viral genome binning from metagenomic Hi-C through graph diffusion.
(academic.oup.com)
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Wang S
…
Du Y
Bioinformatics
2026-07-01
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#metagenomics
#virology
#binning
#microbiome
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0
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RAmpSim: a thermodynamic simulator for hybridization capture in metagenomic sequencing.
(academic.oup.com)
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Zhang A
…
Yu YW
Bioinformatics
2026-07-01
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#metagenomics
#sequencing
#simulation
#hybridization
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0
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Optimizing sparse and skew hashing: faster k-mer dictionaries.
(academic.oup.com)
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Pibiri GE
…
Patro R
Bioinformatics
2026-07-01
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#sequencing
#indexing
#metagenomics
#algorithms
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0
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Meta2DB: Curated shotgun metagenomic feature sets and metadata for health state prediction.
(academic.oup.com)
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Kok CR
…
Be NA
Bioinformatics
2026-07-01
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#metagenomics
#microbiome
#database
#metadata
#classification
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0
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Viral communities from long-term anaerobic alkane-oxidizing enrichments encode predicted cell surface adhesion functions.
(academic.oup.com)
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Narayanan AK
…
Orphan VJ
The ISME Journal
2026-07-01
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#virology
#metagenomics
#alkane
#archaea
#sediment
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0
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Spatial and Melt-Season Controls on the Downstream Contribution and Persistence of Glacier-Originating Bacteria Along a Glacier-Fed Stream Continuum.
(sfamjournals.onlinelibrary.wiley.com)
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Yang Q
…
Liu Y
Environmental Microbiology
2026-07-01
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#microbiome
#metagenomics
#ecology
#glaciers
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0
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Isolation of a Cohort of Giant Viruses From Above the Arctic Circle in Northern Norway.
(sfamjournals.onlinelibrary.wiley.com)
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Queiroz VF
…
Almeida GMF
Environmental Microbiology
2026-07-01
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#virology
#isolation
#environmental
#metagenomics
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0
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Bacterial extracellular vesicles exhibit distinct functional potential across biogeographic provinces of the South Pacific Ocean.
(academic.oup.com)
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Fadeev E
…
Herndl GJ
The ISME Journal
2026-07-01
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#proteomics
#extracellular vesicles
#microbiome
#marine
#metagenomics
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