|
0
|
|
Multi-organ single-cell transcriptomic atlas identifies QrIAA14 as a candidate negative regulator of adventitious root development in Quercus robur.
(journals.plos.org)
|
Hui W
…
He F
PLOS Genetics
2026-09-01
|
#transcriptomics
#single-cell
#plants
#auxin
|
|
0
|
|
Concerted changes in the pediatric single-cell intestinal ecosystem before and after anti-TNF blockade.
(elifesciences.org)
|
Zheng HB
…
Kean LS
eLife
2026-09-01
|
#transcriptomics
#single-cell
#crohn's disease
#inflammation
#immunology
|
|
0
|
|
TIME in motion: How response takes shape.
(linkinghub.elsevier.com)
|
Chin WL
…
Lesterhuis WJ
Cancer Cell
2026-09-01
|
#immunotherapy
#single-cell
#cancer
#biomarker
#microenvironment
|
|
0
|
|
A single-cell atlas of multiple myeloma defines malignant archetypes and proliferative states.
(nature.com)
|
Zada M
…
Amit I
Nature Genetics
2026-09-01
|
#myeloma
#transcriptomics
#single-cell
#immunotherapy
#heterogeneity
|
|
0
|
|
Cross-species single-cell atlas of the striatum defines cell-type and subregion disease vulnerabilities.
(linkinghub.elsevier.com)
|
Linville RM
…
Heiman M
Cell
2026-09-01
|
#transcriptomics
#single-cell
#striatum
#neurodegeneration
#huntington's
|
|
0
|
|
Spatial isoform sequencing at single-cell resolution reveals cell-type-specific spatial isoform variability in multiple brain cell types.
(nature.com)
|
Michielsen L
…
Tilgner HU
Nature Methods
2026-09-01
|
#isoforms
#spatial-transcriptomics
#single-cell
#long-read-sequencing
#neurobiology
|
|
0
|
|
Gene-Chronos: parameter-efficient developmental time inference using a pretrained single-cell foundation model.
(academic.oup.com)
|
Liu Y
…
Tian T
Briefings in Bioinformatics
2026-09-01
|
#transcriptomics
#single-cell
#temporal
#foundation-models
|
|
0
|
|
scDiagnostics: systematic assessment of cell type annotation in single-cell transcriptomics data.
(academic.oup.com)
|
Christidis A
…
Geistlinger L
Briefings in Bioinformatics
2026-09-01
|
#transcriptomics
#single-cell
#annotation
#quality control
|
|
0
|
|
ELISA (Embedding-Linked Interactive Single-cell Agent): an interpretable hybrid generative Artificial Intelligence agent for expression-grounded discovery in single-cell genomics.
(academic.oup.com)
|
Coser O
Briefings in Bioinformatics
2026-09-01
|
#transcriptomics
#single-cell
#gene expression
#machine learning
#pathway analysis
|
|
0
|
|
Systematic benchmarking and optimal strategy selection of cross-species integration methods.
(academic.oup.com)
|
Wang R
…
Wang GD
Briefings in Bioinformatics
2026-09-01
|
#transcriptomics
#single-cell
#integration
#benchmarking
#cross-species
|
|
0
|
|
scASprofiler: profiling single-cell RNA splicing with a deep convolutional generative network.
(academic.oup.com)
|
Hu P
…
Xing Y
Briefings in Bioinformatics
2026-09-01
|
#transcriptomics
#splicing
#single-cell
#sequencing
#imputation
|
|
0
|
|
Single-cell atlas of transcriptomic vulnerability across brain disorders.
(nature.com)
|
Lee D
…
Roussos P
Nature
2026-09-01
|
#transcriptomics
#single-cell
#neurodegeneration
#brain
#schizophrenia
|
|
0
|
|
Lifespan single-cell transcriptomic atlas of the human prefrontal cortex.
(nature.com)
|
Yang H
…
Roussos P
Nature
2026-09-01
|
#transcriptomics
#aging
#single-cell
#neurodevelopment
#neurodegeneration
|
|
0
|
|
Single-cell multi-omic profiling of heterogeneous PROCR(+) cells in mouse mammary gland and its implication for breast cancer.
(linkinghub.elsevier.com)
|
Yan KK
…
Yu J
iScience
2026-09-01
|
#transcriptomics
#single-cell
#breast cancer
#stemness
#chromatin
|
|
0
|
|
Single-cell-level perturbation-induced and condition-related signal estimation with batch effect removal using NDreamer.
(academic.oup.com)
|
Xiao X
…
Wang Z
Briefings in Bioinformatics
2026-09-01
|
#single-cell
#batch correction
#transcriptomics
#perturbation
#neurodegeneration
|
|
0
|
|
Benchmarking methods for inferring single-cell transcription factor activity using large-scale perturbation sequencing data.
(academic.oup.com)
|
Zhu Y
…
Wang Z
Briefings in Bioinformatics
2026-09-01
|
#transcriptomics
#single-cell
#benchmarking
#gene regulation
#perturbation
|
|
0
|
|
Pushing the limits of single-cell proteomics to investigate bacterial heterogeneity using bacSCP.
(nature.com)
|
Leodolter J
…
Matzinger M
Nature Communications
2026-09-01
|
#proteomics
#single-cell
#stress response
#heterogeneity
|
|
0
|
|
Stepwise multi-scale reconstruction of cell spatial organization from single-cell RNA sequencing data with Cell2space.
(academic.oup.com)
|
Pan J
…
Sun D
Briefings in Bioinformatics
2026-09-01
|
#transcriptomics
#single-cell
#deep learning
#tissue architecture
|
|
0
|
|
Topology-guided dual-masked contrastive learning for weakly supervised cell-type annotation in single-cell multi-omics.
(academic.oup.com)
|
Zhang Y
…
Wei H
Briefings in Bioinformatics
2026-09-01
|
#single-cell
#multi-omics
#representation learning
#cell annotation
#active learning
|