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0
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Genome assemblies and annotations are not static and need support for tracking their evolution.
(academic.oup.com)
|
Dimonaco NJ
…
Vickers M
Briefings in Bioinformatics
2026-07-03
|
#assembly
#annotation
#bioinformatics
#genomics
|
|
0
|
|
DeepKOALA: a scalable deep learning framework for KEGG Orthology assignment.
(academic.oup.com)
|
Yu Z
…
Ogata H
Briefings in Bioinformatics
2026-07-03
|
#deep learning
#annotation
#sequencing
#metagenomics
|
|
0
|
|
scDifformer: diffusion-based post-training for virtual cell modeling across large-scale single-cell data.
(academic.oup.com)
|
Xiao Z
…
Guo L
Nucleic Acids Research
2026-07-03
|
#transcriptomics
#single-cell
#annotation
#diffusion models
#denoising
|
|
0
|
|
SA-MTP: a structure-aware framework for multifunctional therapeutic peptide annotation.
(academic.oup.com)
|
Yu W
…
Sun N
Briefings in Bioinformatics
2026-07-03
|
#peptide
#annotation
#prediction
#drug discovery
|
|
0
|
|
Efficient evidence-based genome annotation with EviAnn.
(nature.com)
|
Zimin AV
…
Salzberg SL
Nature Methods
2026-07-03
|
#annotation
#transcriptomics
#sequencing
#genomics
|
|
0
|
|
DeNovoSeer:a deep learning framework for pathogenicity prediction of De novo mutations.
(academic.oup.com)
|
Qiu R
…
Zhao G
Briefings in Bioinformatics
2026-07-03
|
#pathogenicity
#variants
#deep learning
#prediction
#annotation
|
|
0
|
|
LipiDetective: a deep learning model for the identification of molecular lipid species in tandem mass spectra.
(academic.oup.com)
|
Wurf V
…
Pauling JK
Briefings in Bioinformatics
2026-07-03
|
#mass spectrometry
#lipidomics
#deep learning
#annotation
|
|
0
|
|
PromptSTG: prototype-guided prompting for few-shot spatial transcriptomics annotation.
(academic.oup.com)
|
Guan R
…
Han X
Briefings in Bioinformatics
2026-07-03
|
#transcriptomics
#annotation
#cell-type
#graph learning
|
|
0
|
|
Uncovering species- and drug-class-specific antimicrobial resistance mechanisms from large-scale whole-genome sequencing data using discordance analysis and machine learning.
(academic.oup.com)
|
Cheon NJ
…
Unno T
Briefings in Bioinformatics
2026-07-03
|
#amr
#sequencing
#machine learning
#genotype-phenotype
#annotation
|