|
0
|
|
Perspective on human diagnostic and national reference laboratory preparedness for zoonotic influenza in Europe.
(eurosurveillance.org)
|
Felix Garza ZC
…
Meijer A
Eurosurveillance
2026-07-01
|
#influenza
#zoonosis
#diagnostics
#sequencing
#surveillance
|
|
0
|
|
Reproducible profiling of the gut microbiota using surplus clinical faecal immunochemical test samples.
(microbiologyresearch.org)
|
van den Haak MA
…
Kiltie AE
Microbial Genomics
2026-07-01
|
#microbiota
#sequencing
#screening
#reproducibility
|
|
0
|
|
Clinical Characteristics and Molecular Epidemiology of Invasive Nontypeable Haemophilus influenzae at a Tertiary Medical Center in Washington, DC.
(academic.oup.com)
|
Lucar J
…
Satola SW
Open Forum Infectious Diseases
2026-07-01
|
#epidemiology
#infection
#sequencing
#pathogen
#surveillance
|
|
0
|
|
Mitochondrial DNA mutations drive tumor heterogeneity in papillary thyroid carcinoma.
(linkinghub.elsevier.com)
|
Lee HS
…
Song YS
iScience
2026-07-01
|
#thyroid cancer
#mitochondrial
#heterogeneity
#sequencing
#tumor microenvironment
|
|
0
|
|
Detecting and reconstructing breakage-fusion-bridge cycles from long-read sequencing using BFBArchitect.
(academic.oup.com)
|
Li C
…
Bafna V
Bioinformatics
2026-07-01
|
#sequencing
#cancer
#amplification
#structural-variants
#computational
|
|
0
|
|
VDJ-REMIX: REpertoire Module Identification and eXploration.
(academic.oup.com)
|
Amin S
…
Bashford-Rogers R
Bioinformatics
2026-07-01
|
#immunology
#repertoire
#sequencing
#immunity
#dimensionality reduction
|
|
0
|
|
DNA-aware evaluation and debiasing of sequence-to-function models.
(academic.oup.com)
|
Cakmakci D
…
Li Y
Bioinformatics
2026-07-01
|
#machine learning
#sequencing
#epigenomics
#transcriptomics
#regulatory-genomics
|
|
0
|
|
RLBWT-based LCP computation in compressed space for terabase-scale pangenome analysis.
(academic.oup.com)
|
Sanaullah A
…
Zhang S
Bioinformatics
2026-07-01
|
#pan-genomics
#sequencing
#compression
#indexing
|
|
0
|
|
RAmpSim: a thermodynamic simulator for hybridization capture in metagenomic sequencing.
(academic.oup.com)
|
Zhang A
…
Yu YW
Bioinformatics
2026-07-01
|
#metagenomics
#sequencing
#simulation
#hybridization
|
|
0
|
|
Seqwin: ultrafast identification of signature sequences in microbial genomes.
(academic.oup.com)
|
Wang MX
…
Treangen TJ
Bioinformatics
2026-07-01
|
#pathogen detection
#pan-genome
#sequencing
#diagnostics
#genomics
|
|
0
|
|
Amaranth: enhanced single-cell transcript assembly via discriminative modelling of UMI reads and internal reads.
(academic.oup.com)
|
Zang XC
…
Shao M
Bioinformatics
2026-07-01
|
#transcriptomics
#assembly
#single-cell
#isoforms
#sequencing
|
|
0
|
|
Optimizing sparse and skew hashing: faster k-mer dictionaries.
(academic.oup.com)
|
Pibiri GE
…
Patro R
Bioinformatics
2026-07-01
|
#sequencing
#indexing
#metagenomics
#algorithms
|
|
0
|
|
Likelihood-based optimization enables accurate copy number estimation for paralogous genes using exome data.
(academic.oup.com)
|
Byun SY
…
Bansal V
Bioinformatics
2026-07-01
|
#sequencing
#copy_number_variation
#exome
#computational methods
#variants
|
|
0
|
|
Incorporating indel channels into average-case analysis of seed-chain-extend.
(academic.oup.com)
|
Gibson S
…
Yu YW
Bioinformatics
2026-07-01
|
#alignment
#indels
#mutation
#algorithms
#sequencing
|
|
0
|
|
NET-inducing ability of Cutibacterium acnes clinical isolates is associated with pathogenicity in acne vulgaris.
(academic.oup.com)
|
Shih YH
…
Jung CJ
Journal of Infectious Diseases
2026-07-01
|
#virulence
#acne
#immunity
#biofilm
#sequencing
|
|
0
|
|
KCFtools: Rapid alignment-free method for introgression screening and GWAS using k-mer profiles.
(academic.oup.com)
|
Selvanayagam S
…
Schranz ME
Bioinformatics
2026-07-01
|
#introgression
#genome-wide association
#sequencing
#genomics
|
|
0
|
|
Harmonizing standards and resources for the medical genome.
(nature.com)
|
Ashley EA
…
Doudna JA
Nature
2026-07-01
|
#sequencing
#genomics
#diagnostics
#precision medicine
#variant detection
|
|
0
|
|
Recurrent patterns of TOP1-mediated neuronal genomic damage shared by major neurodegenerative disorders.
(linkinghub.elsevier.com)
|
Zhou Z
…
Walsh CA
Cell
2026-07-01
|
#neurodegeneration
#sequencing
#genomic instability
#proteinopathy
|
|
0
|
|
Complete sequencing of medaka genomes reveals the architecture of centromeric satellites, giant mobile elements, and sex chromosomes.
(genome.cshlp.org)
|
Suzuki Y
…
Morishita S
Genome Research
2026-07-01
|
#sequencing
#genome assembly
#repetitive elements
#centromeres
#sex chromosomes
|
|
0
|
|
ClairS: a deep-learning method for long-read tumor-normal pair somatic small variant calling.
(nature.com)
|
Zheng Z
…
Luo R
Nature Methods
2026-07-01
|
#sequencing
#somatic
#variants
#cancer
#deep learning
|
|
0
|
|
Benchmarking DNA extraction protocols across use cases for culture-independent Nanopore metagenomics.
(microbiologyresearch.org)
|
Signorelli T
…
Eagle SHC
Microbial Genomics
2026-07-01
|
#metagenomics
#sequencing
#extraction
#microbiome
#benchmarking
|
|
0
|
|
Refining Salinivibrio pangenome dynamics and biotechnological potential through comparative analysis.
(microbiologyresearch.org)
|
Young CE
…
Scott C
Microbial Genomics
2026-07-01
|
#pan-genomics
#genomics
#sequencing
#halophile
#biosynthesis
|
|
0
|
|
Photoperiodic patterns in miRNA-mRNA pairs and tRNA fragments revealed by time-course co-sequencing in Arabidopsis.
(journals.plos.org)
|
Leung CC
…
Gendron JM
PLOS Genetics
2026-07-01
|
#transcriptomics
#microrna
#sequencing
#photoperiodism
#plants
|
|
0
|
|
Mobile genetic element diversity across Shiga toxin-producing Escherichia coli lineages in French cattle.
(microbiologyresearch.org)
|
Vorimore F
…
Delannoy S
Microbial Genomics
2026-07-01
|
#stec
#sequencing
#plasmids
#virulence
#horizontal transfer
|
|
0
|
|
Molecular epidemiology reveals distinct lineages and genomic profiles of avian pathogenic and commensal Escherichia coli in broiler flocks.
(microbiologyresearch.org)
|
Davam H
…
Hansson I
Microbial Genomics
2026-07-01
|
#sequencing
#virulence
#epidemiology
#pathogenesis
#genomics
|
|
0
|
|
Human infections with Dermatophilus sp.: travel-associated first case and a local cluster in the context of emerging European outbreaks, Basel, Switzerland, 2025 to 2026.
(doi.org)
|
Keller PM
…
Weisser M
Eurosurveillance
2026-07-01
|
#infection
#sequencing
#outbreak
#dermatology
#transmission
|
|
0
|
|
In silico and experimental assessment of the 16S-ITS-23S operon as a genetic marker for high-resolution bacterial species identification.
(microbiologyresearch.org)
|
Yamakawa AC
…
Gweon HS
Microbial Genomics
2026-07-01
|
#sequencing
#taxonomy
#microbiome
#identification
|
|
0
|
|
Seasonal Trade-Offs Between Sedimentary Bacterial Generalists and Specialists Sustain Community Stability in Rivers.
(sfamjournals.onlinelibrary.wiley.com)
|
Zhang S
…
Xu S
Environmental Microbiology
2026-07-01
|
#microbiome
#sequencing
#biodiversity
#ecology
#riverine
|
|
0
|
|
Performance of mechanically sheared DNA in multiplexed Oxford Nanopore sequencing for Salmonella Typhi genomic surveillance.
(microbiologyresearch.org)
|
Maung HT
…
Hiyoshi H
Microbial Genomics
2026-07-01
|
#sequencing
#surveillance
#amr
#genomics
|
|
0
|
|
Novel transposon Tn8026 contributes to the global spread of transmissible linezolid resistance in Enterococcus via a linear plasmid.
(microbiologyresearch.org)
|
Hall MB
…
Roberts LW
Microbial Genomics
2026-07-01
|
#amr
#plasmid
#sequencing
#transposon
#enterococcus
|
|
0
|
|
Benchmarking of real-time, field-deployable whole-genome sequencing of Plasmodium falciparum using Nanopore technology.
(microbiologyresearch.org)
|
Razook Z
…
Barry AE
Microbial Genomics
2026-07-01
|
#sequencing
#malaria
#genomics
#parasite
#variants
|
|
0
|
|
Whole-genome sequencing of Staphylococcus capitis isolates from neonates with healthcare-associated bacteraemia in neonatal intensive care units in Taiwan: comparison between the NRCS-A strain and a non-NRCS-A multi-resistant strain.
(microbiologyresearch.org)
|
Yeh YR
…
Huang YC
Microbial Genomics
2026-07-01
|
#sequencing
#sepsis
#amr
#bacteraemia
#nosocomial
|