|
0
|
|
BiMba: using Vision Mamba to predict protein sites that bind other proteins.
(academic.oup.com)
|
Shirali A
…
Narasimhan G
Bioinformatics
2026-07-01
|
#deep learning
#protein-binding
#prediction
#structural biology
|
|
0
|
|
DiSPA: differential substructure-pathway attention for drug response prediction.
(academic.oup.com)
|
Han Y
…
Lim S
Bioinformatics
2026-07-01
|
#drug response
#pharmacogenomics
#transcriptomics
#deep learning
#pathways
|
|
0
|
|
ProMeta: a meta-learning framework for robust disease diagnosis and prediction from plasma proteomics.
(academic.oup.com)
|
Li H
…
Zhang S
Bioinformatics
2026-07-01
|
#proteomics
#meta-learning
#diagnosis
#deep learning
#biomarker
|
|
0
|
|
Optimizing protein tokenization: reduced amino acid alphabets for efficient and accurate protein language models.
(academic.oup.com)
|
Rannon E
…
Burstein D
Bioinformatics
2026-07-01
|
#protein
#language model
#tokenization
#deep learning
#bioinformatics
|
|
0
|
|
USP-ddG: a unified structural paradigm with data efficacy and mixture-of-experts for predicting mutational effects on protein-protein interactions.
(academic.oup.com)
|
Yu G
…
Wang J
Bioinformatics
2026-07-01
|
#protein-protein interaction
#deep learning
#protein design
#structural prediction
#binding-energy
|
|
0
|
|
Advancing proteomic discovery through optimized multi-stage scoring and deep learning-enhanced open search.
(academic.oup.com)
|
Qian C
…
Chi H
Bioinformatics
2026-07-01
|
#proteomics
#mass spectrometry
#deep learning
#ptm
#peptide-identification
|
|
0
|
|
MiRformer: a dual-transformer-encoder framework for predicting microRNA-mRNA interactions from paired sequences.
(academic.oup.com)
|
Gu J
…
Li Y
Bioinformatics
2026-07-01
|
#deep learning
#microrna
#prediction
#post-transcriptional
#gene regulation
|
|
0
|
|
A novel transformer model of protein domains for viral taxonomy classification.
(academic.oup.com)
|
Shin J
…
Ye Y
Bioinformatics
2026-07-01
|
#taxonomy
#deep learning
#virome
#proteomics
#classification
|
|
0
|
|
OrgNet+: towards robust protein stability prediction with convolutional neural networks.
(academic.oup.com)
|
Sarycheva A
…
Popov P
Bioinformatics
2026-07-01
|
#deep learning
#protein stability
#simulation
#mutation_prediction
#structure prediction
|
|
0
|
|
BulkFormer: A large-scale foundation model for bulk transcriptomes.
(linkinghub.elsevier.com)
|
Kang B
…
Cui Q
Cell Systems
2026-07-01
|
#transcriptomics
#language model
#deep learning
#rna-seq
|
|
0
|
|
ClairS: a deep-learning method for long-read tumor-normal pair somatic small variant calling.
(nature.com)
|
Zheng Z
…
Luo R
Nature Methods
2026-07-01
|
#sequencing
#variants
#somatic
#cancer
#deep learning
|