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#transcriptomics — Monday, June 15, 2026 (12 items)

0 💬 0 Phylogenetic tree inference from single-cell RNA sequencing data with SCITE-RNA. (link.springer.com) robot Zimmermann N Beerenwinkel N Genome Biology 2026-06-15 #phylogenomics #transcriptomics #cancer #clustering
0 💬 0 Prevotella bivia promotes cervical cancer progression and modulates macrophage polarization, while Lactobacillus iners suppresses these processes: evidence from multiomics analysis. (journals.asm.org) robot Zhang T Han S mBio 2026-06-15 #microbiome #cancer #transcriptomics #metabolomics #macrophage
0 💬 0 Bifidobacteria infantis and human milk oligosaccharides have independent and synergistic effects on immune response and amino acid metabolism in germ-free mouse models. (journals.asm.org) robot Mulakala BK Yeruva L mSystems 2026-06-15 #microbiome #immunity #metabolism #transcriptomics #probiotic
0 💬 0 Single-cell RNA sequencing of terminal ileal biopsies identifies signatures of Crohn's disease pathogenesis. (nature.com) robot Krzak M Anderson CA Nature Genetics 2026-06-15 #transcriptomics #crohn's disease #inflammation #immunity #single-cell
0 💬 0 The DBD-alpha4 helix of EWSR1::FLI1 is required for GGAA microsatellite binding that underlies genome regulation in Ewing sarcoma. (elifesciences.org) robot Bayanjargal A Theisen ER eLife 2026-06-15 #cancer #transcriptomics #chromatin #oncogene #binding
0 💬 0 From diet to function: using synthetic microbial communities to map gut microbial interactions. (nature.com) robot Senoo DKJ Hall LJ npj Biofilms and Microbiomes 2026-06-15 #microbiome #metabolism #modeling #transcriptomics #dysbiosis
0 💬 0 Swine acute diarrhea syndrome coronavirus nsp5 induces apoptosis by targeting GATA zinc finger domain-containing protein 2A (GATAD2A/p66alpha). (journals.asm.org) robot Huang H Sun W mBio 2026-06-15 #apoptosis #proteolysis #coronavirus #virulence #transcriptomics
0 💬 0 Telomere-to-telomere genome of Stylosanthes guianensis uncovers symbiotic adaptation to phosphorus-deficient soils. (link.springer.com) robot Liu P Chen Z Genome Biology 2026-06-15 #symbiosis #genomics #transcriptomics #metabolism #adaptation
0 💬 0 SECTOR: structural entropy-based learning of spatiotemporal organisation in spatial transcriptomics. (academic.oup.com) robot Huang L Chen D Bioinformatics 2026-06-15 #transcriptomics #clustering #pseudotime #modeling
0 💬 0 Zika virus infections of human stem cell-derived cerebral organoids reveal viral lineage-specific pathogenesis responses. (journals.asm.org) robot Harding AT Gehrke L mBio 2026-06-15 #neuropathogenesis #transcriptomics #viral infection #immunity #organoid
0 💬 0 Causal circuit tracing reveals distinct computational architectures in single-cell foundation models: inhibitory dominance, biological coherence, and cross-model convergence. (academic.oup.com) robot Kendiukhov I Bioinformatics 2026-06-15 #interpretability #transcriptomics #circuit analysis #autoencoders #language model
0 💬 0 A generalizable Hi-C foundation model for chromatin architecture, single-cell and multiomics analysis across species. (nature.com) robot Wang X Wang S Nature Methods 2026-06-15 #chromatin #modeling #transcriptomics #multi-omics