This site is new - feedback and suggestions welcome via GitHub issues.

#transcriptomics — Tuesday, May 05, 2026 (20 items)

0 💬 0 Benchmarking sketching methods on spatial transcriptomics data. (academic.oup.com) robot Gingerich IK Frost HR Nucleic Acids Research 2026-05-05 #transcriptomics #clustering #sampling
0 💬 0 Histone variant H2A.X represses deposition of active H3K4me3 marks and restricts H2A.W incorporation. (academic.oup.com) robot Madhu A Shivaprasad PV Nucleic Acids Research 2026-05-05 #chromatin #epigenetics #histone #transcriptomics
0 💬 0 Coordinated alternative splicing decisions via stepwise exon definition. (academic.oup.com) robot Kristofori P Li C Nucleic Acids Research 2026-05-05 #splicing #transcriptomics #cancer #modeling
0 💬 0 An auxin-induced transcriptional cascade CmBES1-CmSAUR66 orchestrates the ray floret development in Chrysanthemum morifolium. (pnas.org) robot Jia D Chen F PNAS 2026-05-05 #transcriptomics #auxin #gene regulation
0 💬 0 Multimodal analysis reveals cellular diversity and divergent circuits of the zona incerta. (pnas.org) robot Kast R Feng G PNAS 2026-05-05 #transcriptomics #neuroanatomy #electrophysiology #clustering #neural circuits
0 💬 0 Omnivore RNA pyrophosphatase: a versatile enzyme that efficiently removes diverse protecting groups from the 5' end of RNA. (academic.oup.com) robot Ingle S Belasco JG Nucleic Acids Research 2026-05-05 #enzyme #rna #transcriptomics
0 💬 0 A viral noncoding RNA is a master regulator of gene expression that defines host cell identity and function. (academic.oup.com) robot Gorbea C Cazalla D Nucleic Acids Research 2026-05-05 #transcriptomics #viral infection #post-transcriptional regulation #gene expression #ncrna
0 💬 0 AR-targeted therapies sensitize prostate cancer to cuproptosis by transcriptionally activating FDX1. (pnas.org) robot Li X Yuan F PNAS 2026-05-05 #prostate cancer #cuproptosis #transcriptomics #cell death #amr
0 💬 0 Benchmarking computational methods for identifying and quantifying polyadenylation sites from 3' tag-based single-cell RNA-seq data. (academic.oup.com) robot Bi X Wu X Nucleic Acids Research 2026-05-05 #transcriptomics #polyadenylation #sequencing #benchmarking #clustering
0 💬 0 Are kinocilia motile? (elifesciences.org) robot Eatock RA Kabirova M eLife 2026-05-05 #transcriptomics #gene expression #cilia #inner ear
0 💬 0 Real-time transcriptomic profiling in distinct experimental conditions. (elifesciences.org) robot Butto T Gerber S eLife 2026-05-05 #transcriptomics #sequencing #quality control #rna-seq #expression
0 💬 0 Hopx(+) optic nerve head-astrocytes counter neuronal stress and glaucoma damage. (pnas.org) robot Bernstein SL Hoang T PNAS 2026-05-05 #astrocyte #neuroprotection #glaucoma #extracellular vesicles #transcriptomics
0 💬 0 InSituPREP enables 3D single-cell mapping of interaction-associated gene programs in the breast cancer tumor microenvironment. (academic.oup.com) robot Goldberg T Alon S Nucleic Acids Research 2026-05-05 #transcriptomics #cancer #microenvironment #sequencing
0 💬 0 Signal or noise? RNA-binding proteins and the challenges of binding site assignments. (academic.oup.com) robot Sahadevan S Schwarzl T Nucleic Acids Research 2026-05-05 #sequencing #transcriptomics #binding #reproducibility
0 💬 0 Logistic regression for estimating functional effects with spatial transcriptomics. (academic.oup.com) robot Barkasi M Oviedo HV Nucleic Acids Research 2026-05-05 #spatial omics #transcriptomics #modeling #hypothesis testing #gene expression
0 💬 0 Predicting enhancer-gene links from single-cell multi-omics data by integrating prior Hi-C information. (academic.oup.com) robot Liang X Wang Z Nucleic Acids Research 2026-05-05 #transcriptomics #modeling #regulatory #chromatin #sequencing
0 💬 0 CRAK-Velo: chromatin accessibility kinetics integration improves RNA velocity estimation. (link.springer.com) robot El Kazwini N Sanguinetti G Genome Biology 2026-05-05 #transcriptomics #rna velocity #modeling #cell differentiation #chromatin
0 💬 0 Suppression rather than activation of the integrated stress response (GCN2-ATF4) pathway extends lifespan in the fly. (pnas.org) robot Gotz MS Simons MJP PNAS 2026-05-05 #longevity #stress response #transcriptomics #metabolism
0 💬 0 Diverse stresses differentially regulate rRNA biogenesis and mRNA translation. (academic.oup.com) robot Aldrich A Lyons SM Nucleic Acids Research 2026-05-05 #ribosome #transcriptomics #stress #proteostasis #translation
0 💬 0 Pseudorabies virus triggers ferritinophagy-mediated ferroptosis and neuroinflammation in viral encephalitis. (pnas.org) robot Sun J Yang H PNAS 2026-05-05 #ferroptosis #encephalitis #neuroinflammation #virulence #transcriptomics