|
0
|
|
Fault-tolerant pedigree reconstruction from pairwise kinship relations.
(academic.oup.com)
|
Huang EC
…
Narasimhan VM
Bioinformatics
2026-05-04
|
#modeling
#phylogenomics
#sequencing
|
|
0
|
|
The impact of transcriptome assembly algorithms on downstream quantification in RNA-seq data analysis.
(academic.oup.com)
|
Tan Z
…
Yu T
Briefings in Bioinformatics
2026-05-04
|
#transcriptomics
#assembly
#sequencing
#quantification
|
|
0
|
|
Modeling DNA storage retrieval reliability via sequencing coverage depth.
(academic.oup.com)
|
Cao R
…
Chen X
Briefings in Bioinformatics
2026-05-04
|
#modeling
#sequencing
#reliability
|
|
0
|
|
Response to 'On using clustering statistics for assessing plasmid binning tools accuracy'.
(academic.oup.com)
|
Teixeira M
…
Manson AL
Briefings in Bioinformatics
2026-05-04
|
#assembly
#sequencing
#benchmarking
#plasmid
#binning
|
|
0
|
|
The sequence alignment problem: boundary conditions as the unifying principle.
(academic.oup.com)
|
Gagniuc PA
…
Gagniuc E
Briefings in Bioinformatics
2026-05-04
|
#metagenomics
#phylogenomics
#sequencing
#alignment
|
|
0
|
|
Current trends and challenges in deciphering single molecule resolution maps of single cell transcriptomes.
(academic.oup.com)
|
Schaeper D
…
Janga SC
Briefings in Bioinformatics
2026-05-04
|
#transcriptomics
#sequencing
#single-cell
#barcoding
#isoform
|
|
0
|
|
Semi-supervised disentangled representation learning for single-cell RNA sequencing data.
(academic.oup.com)
|
Liu H
…
Wei Z
Briefings in Bioinformatics
2026-05-04
|
#modeling
#transcriptomics
#sequencing
#clustering
|
|
0
|
|
GraphChIAr: genome-wide super-resolution reconstruction of protein-mediated remote chromatin interactions by augmenting hi-C interaction maps with multiple ChIP-seq profiles.
(academic.oup.com)
|
Dong H
…
Du PF
Briefings in Bioinformatics
2026-05-04
|
#modeling
#chromatin
#sequencing
#deep learning
#gene regulation
|
|
0
|
|
VIRSE: a variational Bayesian framework for RNA structural ensemble inference.
(academic.oup.com)
|
Liang J
…
Song Q
Briefings in Bioinformatics
2026-05-04
|
#modeling
#sequencing
#rna
#inference
|
|
0
|
|
Lense: optimizing data preprocessing in single-cell omics using large language models.
(academic.oup.com)
|
Liu J
…
Ji Z
Briefings in Bioinformatics
2026-05-04
|
#transcriptomics
#sequencing
#clustering
#preprocessing
|
|
0
|
|
Accurate and efficient HiChIP interaction detection by modeling restriction enzyme cut site density as biological signal.
(academic.oup.com)
|
Ding W
…
Jin S
Briefings in Bioinformatics
2026-05-04
|
#modeling
#chromatin
#sequencing
#regulation
#interaction
|
|
0
|
|
gSV: a general structural variant detector using the third-generation sequencing data.
(academic.oup.com)
|
Hao J
…
Yu W
Briefings in Bioinformatics
2026-05-04
|
#genomics
#cancer
#assembly
#sequencing
|
|
0
|
|
APAdeg enhances differentially expressed gene inference by leveraging site-specific signals in APA-seq data.
(academic.oup.com)
|
Sarker B
…
Xu C
Briefings in Bioinformatics
2026-05-04
|
#transcriptomics
#cancer
#sequencing
#polyadenylation
|
|
0
|
|
Toward the regularization of E value from BLAST similarity search into a dissimilarity measure as distance function, and the metrication of protein sequence space.
(academic.oup.com)
|
Mao B
Briefings in Bioinformatics
2026-05-04
|
#alignment
#homology
#sequencing
#clustering
|
|
0
|
|
A knowledge-guided deep learning framework for quantitative nucleic acid testing.
(academic.oup.com)
|
Yang J
…
Zhang D
Briefings in Bioinformatics
2026-05-04
|
#pcr
#diagnostics
#sequencing
#machine learning
|
|
0
|
|
RiSpy: a feature selection-based fingerprinting framework for accurate identification of genome-edited rice lines.
(academic.oup.com)
|
Zolfaghari A
…
D'aes J
Briefings in Bioinformatics
2026-05-04
|
#sequencing
#genome editing
#genotyping
#fingerprinting
#traceability
|
|
0
|
|
Efficient reconstruction of full-length RNA isoforms using ISAtools and large-scale PacBio circular consensus sequencing data.
(academic.oup.com)
|
Chen H
…
Shi ZX
Briefings in Bioinformatics
2026-05-04
|
#isoforms
#transcriptomics
#sequencing
#splicing
|