|
0
|
|
Subset binding enables detection of multimodal patient subgroup patterns and drug target discovery in idiopathic pulmonary fibrosis.
(academic.oup.com)
|
Natsume-Kitatani Y
…
Ueda N
Briefings in Bioinformatics
2026-03-01
|
#proteomics
#biomarker
#clustering
#precision medicine
#pulmonary fibrosis
|
|
0
|
|
A deep adversarial network model for multi-task analysis of single-cell omics data.
(academic.oup.com)
|
Xu J
…
Zeng X
Briefings in Bioinformatics
2026-03-01
|
#transcriptomics
#integration
#clustering
#denoising
|
|
0
|
|
SpatialDG: a novel spatial domain identification method for spatially resolved transcriptomics data based on dual-graph neural network.
(academic.oup.com)
|
Wu J
…
Izzi V
Briefings in Bioinformatics
2026-03-01
|
#modeling
#transcriptomics
#clustering
#tissue
|
|
0
|
|
AICellType: a large language model-based platform for accurate cell type annotation.
(academic.oup.com)
|
Cheng C
…
Jin M
Briefings in Bioinformatics
2026-03-01
|
#transcriptomics
#machine learning
#clustering
#annotation
|
|
0
|
|
The changing landscape of gene expression analysis.
(academic.oup.com)
|
Zhao Q
…
Palpant NJ
Briefings in Bioinformatics
2026-03-01
|
#bioinformatics
#transcriptomics
#sequencing
#clustering
|
|
0
|
|
Integrating feature selection with unsupervised deep embedding for clustering single-cell RNA-seq data.
(academic.oup.com)
|
Zhong C
…
Wei Z
Briefings in Bioinformatics
2026-03-01
|
#modeling
#transcriptomics
#sequencing
#clustering
|
|
0
|
|
scSCCNIA: similarity matrix based contrastive clustering with neighbor information aggregation for single-cell RNA sequencing data.
(academic.oup.com)
|
Wang J
…
Zheng CH
Briefings in Bioinformatics
2026-03-01
|
#modeling
#transcriptomics
#sequencing
#clustering
|
|
0
|
|
SpaFun: discovering domain-specific spatial expression patterns and new disease-relevant genes using functional principal component analysis.
(academic.oup.com)
|
Jiang X
…
Xu L
Briefings in Bioinformatics
2026-03-01
|
#transcriptomics
#cancer
#clustering
|
|
0
|
|
Benchmarking cell-type-specific spatially variable gene detection methods.
(academic.oup.com)
|
Yao H
…
Fang Z
Briefings in Bioinformatics
2026-03-01
|
#transcriptomics
#benchmarking
#clustering
#cell-type
|
|
0
|
|
GDSim: accurate simulation for single-cell transcriptomes based on the guided diffusion model.
(academic.oup.com)
|
Wang T
…
Chen J
Briefings in Bioinformatics
2026-03-01
|
#modeling
#transcriptomics
#sequencing
#clustering
|
|
0
|
|
NetCrafter: ontology-derived gene network modeling and functional interpretation.
(academic.oup.com)
|
Lee Y
…
Yoon S
Briefings in Bioinformatics
2026-03-01
|
#clustering
#gene interaction
#omics
#functional annotation
#network modeling
|
|
0
|
|
scDIAGRAM: detecting chromatin compartments from individual single-cell Hi-C matrix without imputation or reference features.
(academic.oup.com)
|
Peng Y
…
Ge H
Briefings in Bioinformatics
2026-03-01
|
#modeling
#chromatin
#single-cell
#clustering
|
|
0
|
|
Interactive visualization of metric distortion in nonlinear data embeddings using the distortions package.
(academic.oup.com)
|
Sankaran K
…
Meila M
Briefings in Bioinformatics
2026-03-01
|
#genomics
#visualization
#clustering
#dimensionality reduction
|
|
0
|
|
Castl: robust identification of spatially variable genes in spatial transcriptomics via an ensemble-based framework.
(academic.oup.com)
|
Yu Y
…
Zheng X
Briefings in Bioinformatics
2026-03-01
|
#modeling
#transcriptomics
#clustering
|
|
0
|
|
Finding Significant Hits in Networks: a network-based tool for analyzing gene-level P-values to identify significant genes missed by standard methods.
(academic.oup.com)
|
Acharya S
…
Brent MR
Briefings in Bioinformatics
2026-03-01
|
#networks
#clustering
#association
#genome-wide association
|