|
0
|
|
SMIntegration: A web tool for comprehensive spatial metabolomics and transcriptomics integrated analysis and visualization.
(academic.oup.com)
|
Deng H
…
Mei Z
GigaScience
2026-01-21
|
#metabolomics
#transcriptomics
#integration
#visualization
|
|
0
|
|
scDenorm: a denormalization tool for integrating single-cell transcriptomics data.
(academic.oup.com)
|
Huang Y
…
Miao Z
GigaScience
2026-01-21
|
#transcriptomics
#integration
#normalization
#batch
|
|
0
|
|
SpaceBF: spatial coexpression analysis using Bayesian fused approaches in spatial omics datasets.
(academic.oup.com)
|
Seal S
…
Neelon B
GigaScience
2026-01-21
|
#transcriptomics
#proteomics
#coexpression
#modeling
#imaging
|
|
0
|
|
Commensal microbe-derived butyrate enhances T follicular helper cell function to boost mucosal vaccine efficacy.
(link.springer.com)
|
Ko H
…
Im SH
Microbiome
2026-01-21
|
#immunity
#microbiome
#vaccination
#metabolism
#transcriptomics
|
|
0
|
|
Charting human organogenesis across the Carnegie stages from a whole-embryo perspective.
(academic.oup.com)
|
Pan J
…
Ding G
GigaScience
2026-01-21
|
#transcriptomics
#embryogenesis
#single-cell
#organogenesis
|
|
0
|
|
Dissecting glioblastoma risk signatures in the tumor immune microenvironment based on multi-dimensional transcriptomics.
(academic.oup.com)
|
Li T
…
Hu C
GigaScience
2026-01-21
|
#transcriptomics
#glioblastoma
#immunity
#modeling
#biomarker
|
|
0
|
|
Evaluating deconvolution methods using real bulk RNA-expression data for robust prognostic insights across cancer types.
(link.springer.com)
|
Li M
…
Tian W
Genome Biology
2026-01-21
|
#deconvolution
#transcriptomics
#cancer
#prognosis
#immunology
|
|
0
|
|
Expression-driven genetic dependency reveals targets for precision oncology.
(academic.oup.com)
|
Elmas A
…
Huang KL
GigaScience
2026-01-21
|
#cancer
#transcriptomics
#proteomics
#modeling
#druggable
|
|
0
|
|
Charting immune variation through genetics and single-cell genomics.
(academic.oup.com)
|
Powell JE
GigaScience
2026-01-21
|
#single-cell
#transcriptomics
#immunity
#epigenomics
#atlas
|
|
0
|
|
Stereo-cell deciphers the spatial and functional heterogeneity of polyploid hepatocytes.
(academic.oup.com)
|
Yang Y
…
Hao S
GigaScience
2026-01-21
|
#transcriptomics
#single-cell
#metabolism
#heterogeneity
|
|
0
|
|
GEfetch2R: fetching single-cell/bulk RNA-seq data from public repositories to R and benchmarking the subsequent format conversion tools.
(academic.oup.com)
|
Song Y
…
Gao J
GigaScience
2026-01-21
|
#transcriptomics
#sequencing
#preprocessing
#clustering
|
|
0
|
|
Core passive and facultative mTOR-mediated mechanisms coordinate mammalian protein synthesis and decay.
(linkinghub.elsevier.com)
|
Sun MS
…
Suter DM
Cell Systems
2026-01-21
|
#proteomics
#metabolism
#modeling
#transcriptomics
|
|
0
|
|
A combinatorial transcription factor screening platform for immune cell reprogramming.
(linkinghub.elsevier.com)
|
Kurochkin I
…
Pereira CF
Cell Systems
2026-01-21
|
#transcriptomics
#reprogramming
#screening
#immunotherapy
#immunity
|
|
0
|
|
High-throughput mapping of modular regulatory domains in human RNA-binding proteins.
(linkinghub.elsevier.com)
|
Thurm AR
…
Bintu L
Cell Systems
2026-01-21
|
#rna binding
#transcriptomics
#high-throughput
#proteomics
#modeling
|
|
0
|
|
SCSEQ: A web tool for analyzing single-cell RNA-seq data.
(academic.oup.com)
|
Du S
…
He J
GigaScience
2026-01-21
|
#transcriptomics
#clustering
#sequencing
#heterogeneity
|
|
0
|
|
RNA-SeqEZPZ: a point-and-click pipeline for comprehensive transcriptomics analysis with interactive visualizations.
(academic.oup.com)
|
Taslim C
…
Theisen ER
GigaScience
2026-01-21
|
#transcriptomics
#sequencing
#pipeline
#differential expression
|
|
0
|
|
Leveraging machine learning and network biology approaches to predict brain gene expression from blood transcriptomes.
(academic.oup.com)
|
Sevim Bayrak C
…
Zhang B
GigaScience
2026-01-21
|
#transcriptomics
#machine learning
#biomarker
#immunity
#modeling
|
|
0
|
|
Single-nucleus multiple-organ chromatin accessibility landscape in the adult rat.
(academic.oup.com)
|
Li R
…
Yuan Y
GigaScience
2026-01-21
|
#chromatin
#single-cell
#transcriptomics
#atlas
#gene regulation
|
|
0
|
|
ZNF331 modulates early embryonic transcription during zygotic genome activation in goat.
(academic.oup.com)
|
Yang Y
…
Wang F
GigaScience
2026-01-21
|
#transcriptomics
#embryogenesis
#chromatin
#transcription
#epigenetics
|
|
0
|
|
Integrative single-cell transcriptomics and proteomics reveal an immunometabolic framework for MSC-exosome-mediated remodeling of expanded NK cells.
(academic.oup.com)
|
Fu Y
…
Dong X
GigaScience
2026-01-21
|
#transcriptomics
#proteomics
#immunity
#exosome
#metabolism
|
|
0
|
|
An interpretable Graph-Regularized Optimal Transport Framework for Diagonal Single-Cell Integrative Analysis.
(academic.oup.com)
|
Wang Z
…
Shen L
GigaScience
2026-01-21
|
#transcriptomics
#clustering
#integration
#modeling
|
|
0
|
|
4D single-cell spatial transcriptomics reveals dynamic morphogenetic gradients and regenerative domains in planarians.
(academic.oup.com)
|
Han K
…
Xu M
GigaScience
2026-01-21
|
#transcriptomics
#regeneration
#morphogenesis
#cell fate
|
|
0
|
|
Interactive analysis of single-cell trajectories in 3D space with Cell Journey.
(academic.oup.com)
|
Panas D
…
Tabaka M
GigaScience
2026-01-21
|
#transcriptomics
#visualization
#differentiation
#single-cell
#trajectory
|
|
0
|
|
Comparative evaluation of gene selection approaches in transcriptomics: bias correction and visualization with TransPro.
(academic.oup.com)
|
Yu D
…
Bu W
GigaScience
2026-01-21
|
#transcriptomics
#gene selection
#bias correction
#visualization
#enrichment
|
|
0
|
|
Chromosome-level genome assembly and transcriptomes of the leaf insect Cryptophyllium westwoodii provide insights into the evolution of leaf-like masquerade.
(academic.oup.com)
|
Mao C
…
Li X
GigaScience
2026-01-21
|
#assembly
#transcriptomics
#phylogenomics
#evolution
|
|
0
|
|
NEXT-scASV: a Nextflow pipeline for allele-specific variant calling from single-cell RNA-seq data.
(academic.oup.com)
|
Shevtsov A
…
Medvedeva YA
GigaScience
2026-01-21
|
#transcriptomics
#sequencing
#variant calling
#single-cell
#pipeline
|
|
0
|
|
Exploring phenotype-related single-cells through attention-enhanced representation learning.
(link.springer.com)
|
Wu Q
…
Li Y
Genome Medicine
2026-01-21
|
#single-cell
#transcriptomics
#deep learning
#clustering
#phenotype
|
|
0
|
|
cxcl18b-defined transitional state-specific nitric oxide drives injury-induced Muller glia cell-cycle re-entry in the zebrafish retina.
(elifesciences.org)
|
Ye A
…
Chen C
eLife
2026-01-21
|
#regeneration
#transcriptomics
#inflammation
#retina
|