|
0
|
|
Non-negative matrix factorization and deconvolution as a dual simplex problem.
(link.springer.com)
|
Kleverov D
…
Artyomov MN
Genome Biology
2026-01-14
|
#modeling
#transcriptomics
#optimization
#deconvolution
|
|
0
|
|
G34R cancer mutation alters the conformational ensemble and dynamics of the histone H3.3 tails.
(academic.oup.com)
|
Fuchs HA
…
Musselman CA
Nucleic Acids Research
2026-01-14
|
#modeling
#chromatin
#cancer
#epigenomics
|
|
0
|
|
TiRNA: a coarse-grained method with temperature and ion effects for RNA structure folding and prediction.
(academic.oup.com)
|
Wang X
…
Tan ZJ
Nucleic Acids Research
2026-01-14
|
#modeling
#prediction
#rna
#folding
|
|
0
|
|
An AI-guided framework reveals conserved features governing microRNA strand selection.
(academic.oup.com)
|
Meadows D
…
Mangone M
Nucleic Acids Research
2026-01-14
|
#modeling
#gene expression
#machine learning
#microrna
#biogenesis
|
|
0
|
|
FSBLUP: a novel strategy of fusion similarity matrix construction via optimally integrating intermediate omics data to enhance genomic prediction.
(link.springer.com)
|
Xue Y
…
Liu JF
Genome Biology
2026-01-14
|
#genomics
#modeling
#prediction
#multi-omics
|
|
0
|
|
Deciphering the 3D genome organization across species from Hi-C data.
(academic.oup.com)
|
Shkolikov A
…
Gelfand MS
Nucleic Acids Research
2026-01-14
|
#modeling
#phylogenomics
#chromatin
#evolution
#gene regulation
|
|
0
|
|
Rare taxa modulate the emergence of dominants in microbial communities.
(journals.asm.org)
|
Wang J
…
Li Y-z
mBio
2026-01-14
|
#microbiome
#modeling
#metabolism
#competition
#community assembly
|
|
0
|
|
Impacts of ectomycorrhizal forest change on nutrient cycling, forest resilience, and ecosystem services.
(academic.oup.com)
|
Bidartondo MI
…
Suz LM
The ISME Journal
2026-01-14
|
#microbiome
#modeling
#mycorrhizal
#forest ecology
#nutrient cycling
|
|
0
|
|
Phage infection fronts trigger early sporulation and viral entrapment in bacterial populations.
(academic.oup.com)
|
Magalie A
…
Weitz JS
The ISME Journal
2026-01-14
|
#modeling
#infection
#biofilm
#phage
#sporulation
|
|
0
|
|
Predicting microbial community responses to disturbance using genome-resolved trait-based life-history strategies.
(academic.oup.com)
|
Santillan E
…
Wuertz S
The ISME Journal
2026-01-14
|
#microbiome
#ecology
#modeling
#metabolism
#metagenomics
|
|
0
|
|
Single-cell assembled genomes predict enhanced bacterial metabolic cross-feeding potential in carbon-enriched soils.
(academic.oup.com)
|
Guo H
…
Shen Q
The ISME Journal
2026-01-14
|
#microbiome
#modeling
#metabolism
#metagenomics
#sequencing
|
|
0
|
|
A unifying account of replay as context-driven memory reactivation.
(elifesciences.org)
|
Zhou Z
…
Schapiro AC
eLife
2026-01-14
|
#modeling
#memory
#neural
#consolidation
|
|
0
|
|
Microbiome assembly statistics toward ecosystem-scale insights, forecasting, and management.
(academic.oup.com)
|
Toju H
…
Weckwerth W
The ISME Journal
2026-01-14
|
#microbiome
#modeling
#dysbiosis
#assembly
#stability
|
|
0
|
|
Rapid resistance evolution against phage cocktails.
(academic.oup.com)
|
van der Steen BA
…
Mulla Y
The ISME Journal
2026-01-14
|
#modeling
#amr
#evolution
#phage
|
|
0
|
|
Sensitivity of microbial spatial self-organization to surface friction depends on metabolic interactions.
(academic.oup.com)
|
Tandler P
…
Gogia G
The ISME Journal
2026-01-14
|
#microbiome
#modeling
#metabolism
#self-organization
#biofilm
|
|
0
|
|
Temperature alters interactions and keystone taxa in the marine microbiome.
(academic.oup.com)
|
Merz E
…
Barton AD
The ISME Journal
2026-01-14
|
#microbiome
#modeling
#community
#temperature
#interactions
|
|
0
|
|
Host-linked virome assembly and turnover predict bacterial community structure in wastewater treatment systems.
(academic.oup.com)
|
Yu J
…
Lee PKH
The ISME Journal
2026-01-14
|
#microbiome
#modeling
#metagenomics
#coevolution
#virome
|
|
0
|
|
Predator-prey dynamics of Vibrio cholerae on chitin suggest an alternative mode of biofilm formation in marine snow conditions.
(academic.oup.com)
|
Holt JD
…
Nadell CD
The ISME Journal
2026-01-14
|
#modeling
#metabolism
#predation
#biofilm
|
|
0
|
|
Macroecological processes impact Australian soil resistomes and climatically stable regions with anthropogenic activities serve as ARG hotspots.
(academic.oup.com)
|
Du M
…
McBratney A
The ISME Journal
2026-01-14
|
#microbiome
#modeling
#amr
#metabolism
#metagenomics
|
|
0
|
|
Ranking distribution reveals opposite shifts in evenness and survival thresholds of phytoplankton under environmental stress.
(academic.oup.com)
|
Ye S
…
Li M
The ISME Journal
2026-01-14
|
#modeling
#stress
#phytoplankton
#diversity
#eutrophication
|
|
0
|
|
Synergistic regulatory mechanisms in glycolysis revealed by pathway transplantation.
(journals.asm.org)
|
Knibbe E
…
Daran-Lapujade P
mBio
2026-01-14
|
#modeling
#metabolism
#synthetic biology
#allostery
|
|
0
|
|
Density-dependent feedback and higher-order interactions enable coexistence in phage-bacteria community dynamics.
(academic.oup.com)
|
Dey R
…
Weitz JS
The ISME Journal
2026-01-14
|
#microbiome
#modeling
#phage
#community
#coexistence
|