|
0
|
|
We are underprepared for bedaquiline resistance: a call for clinical and programmatic readiness.
(academic.oup.com)
|
Cross GB
…
Berry C
Clinical Infectious Diseases
2026-01-07
|
#amr
#sequencing
#surveillance
#tb
|
|
0
|
|
DL-GapFilling: a novel deep learning framework for improved plant genome gap filling.
(academic.oup.com)
|
Chen Y
…
Wang G
Briefings in Bioinformatics
2026-01-07
|
#assembly
#sequencing
#genome
#deep learning
|
|
0
|
|
Pangenome-guided sequence assembly via binary optimization.
(academic.oup.com)
|
Cudby J
…
Strelchuk S
Briefings in Bioinformatics
2026-01-07
|
#assembly
#sequencing
#pangenome
#optimization
|
|
0
|
|
A comprehensive survey of genome language models in bioinformatics.
(academic.oup.com)
|
Shu L
…
Zhang D
Briefings in Bioinformatics
2026-01-07
|
#modeling
#phylogenomics
#transcriptomics
#sequencing
|
|
0
|
|
NanoPrePro: a fully equipped, fast, and memory-efficient preprocessor for nanopore transcriptomic sequencing.
(academic.oup.com)
|
Chu CC
…
Lin YJ
Briefings in Bioinformatics
2026-01-07
|
#nanopore
#transcriptomics
#sequencing
#preprocessing
|
|
0
|
|
Computational tools for tandem repeat detection using long-read sequencing.
(academic.oup.com)
|
Liu Q
…
Li J
Briefings in Bioinformatics
2026-01-07
|
#genomics
#sequencing
#genotyping
#tandem repeats
|
|
0
|
|
DNA methylation analysis of NOTCH1 variants reveals the first episignature for non-syndromic congenital heart defects.
(link.springer.com)
|
Dombrowsky G
…
Hitz MP
Genome Medicine
2026-01-07
|
#methylation
#epigenetics
#sequencing
#congenital heart defects
#episignature
|
|
0
|
|
plmmr: an R package to fit penalized linear mixed models for genome-wide association data with complex correlation structure.
(academic.oup.com)
|
Peter TK
…
Breheny PJ
Briefings in Bioinformatics
2026-01-07
|
#genomics
#modeling
#sequencing
#genome-wide association
|
|
0
|
|
Detection of alternative splicing: deep sequencing or deep learning?
(academic.oup.com)
|
Hackl LM
…
Tsoy O
Briefings in Bioinformatics
2026-01-07
|
#transcriptomics
#splicing
#sequencing
#prediction
#deep learning
|
|
0
|
|
CircRM: profiling circular RNA modifications from nanopore direct RNA sequencing.
(academic.oup.com)
|
Li J
…
Zhang Y
Briefings in Bioinformatics
2026-01-07
|
#nanopore
#sequencing
#epigenomics
#modifications
#ncrna
|
|
0
|
|
GFSeeker: a splicing-graph-based approach for accurate gene fusion detection from long-read RNA sequencing data.
(academic.oup.com)
|
Wang B
…
Jiang T
Briefings in Bioinformatics
2026-01-07
|
#modeling
#transcriptomics
#cancer
#sequencing
#fusion
|
|
0
|
|
A de novo assembly based fusion gene detection concept based on DNA-seq data of 100 Ewing sarcoma cases.
(academic.oup.com)
|
Zhao X
…
Korsching E
Briefings in Bioinformatics
2026-01-07
|
#cancer
#assembly
#sequencing
#fusion
|
|
0
|
|
PHScaffolding: a hypergraph clustering and dual-weight integration strategy for scaffolding with Pore-C reads.
(academic.oup.com)
|
Su Q
…
Guo F
Briefings in Bioinformatics
2026-01-07
|
#assembly
#sequencing
#clustering
#scaffolding
|
|
0
|
|
A novel two-sample Mendelian randomization framework integrating common and rare variants: application to assess the effect of HDL-C on preeclampsia risk.
(academic.oup.com)
|
Zhang Y
…
Yan Q
Briefings in Bioinformatics
2026-01-07
|
#sequencing
#variants
#mendelian randomization
#causal inference
#preeclampsia
|
|
0
|
|
GeNePi: a graphics processing unit enhanced next-generation bioinformatics pipeline for whole-genome sequencing analysis.
(academic.oup.com)
|
Marangoni S
…
Cavalli A
Briefings in Bioinformatics
2026-01-07
|
#assembly
#sequencing
#variant
#pipeline
|
|
0
|
|
Ab initio detection of multiple epitranscriptomic modifications from Oxford nanopore technology direct RNA sequencing data.
(academic.oup.com)
|
Fonzino A
…
Picardi E
Briefings in Bioinformatics
2026-01-07
|
#transcriptomics
#sequencing
#epigenomics
#basecalling
|
|
0
|
|
scGACL: a generative adversarial network with multi-scale contrastive learning for accurate single-cell RNA sequencing imputation.
(academic.oup.com)
|
Jiang Y
…
Guo F
Briefings in Bioinformatics
2026-01-07
|
#modeling
#transcriptomics
#sequencing
#imputation
|