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0
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|
D- and L-lactate consumers are taxonomically, biochemically, and energetically different.
(academic.oup.com)
|
Allaart MT
…
Angenent LT
ISME Communications
2026-01-01
|
#microbiome
#metagenomics
#fermentation
#metabolism
#gut
|
|
0
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|
Spatial and depth structuring predominate over temporal variation in Mediterranean climate grassland soil viral communities.
(academic.oup.com)
|
Fudyma JD
…
Emerson JB
ISME Communications
2026-01-01
|
#virome
#metagenomics
#soil
#biogeography
|
|
0
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|
Deciphering taxon-specific metabolic shifts during pathogenic fungal infection in leaf-cutter ant fungal gardens.
(academic.oup.com)
|
Velickovic M
…
Burnum-Johnson KE
ISME Communications
2026-01-01
|
#metabolomics
#proteomics
#pathogenesis
#metagenomics
#microbiome
|
|
0
|
|
Intricate microbiome differences observed in lactating cows across methane intensity phenotypes.
(academic.oup.com)
|
Maynez-Perez AO
…
Schwarm A
ISME Communications
2026-01-01
|
#metagenomics
#metatranscriptomics
#microbiome
#ruminant
#metabolism
|
|
0
|
|
Multi-omics uncovers nutrient stress-driven interactions in a synthetic Prymnesium parvum holobiont, with vitamin B(12)-limitation revealing mutualism.
(academic.oup.com)
|
Patron L
…
Garnier M
ISME Communications
2026-01-01
|
#symbiosis
#microbiome
#transcriptomics
#metabolism
#metagenomics
|
|
0
|
|
Metagenomics reveal unrestricted dispersal of extreme halophiles and higher connectivity among coastal vs. inland solar salterns and hypersaline lakes.
(academic.oup.com)
|
Viver T
…
Rossello-Mora R
ISME Communications
2026-01-01
|
#metagenomics
#microbiome
#halophiles
#dispersal
#evolution
|
|
0
|
|
Land use reshapes soil cercozoan functional architecture through soil chemistry and fungal networks.
(academic.oup.com)
|
Tang Y
…
McBratney A
ISME Communications
2026-01-01
|
#metagenomics
#soil
#microbiome
#protists
#ecology
|
|
0
|
|
Geminivirus diversity and community structure at the scale of agro-ecological systems in two localities of Burkina Faso.
(academic.oup.com)
|
Ouattara A
…
Lefeuvre P
ISME Communications
2026-01-01
|
#virology
#metagenomics
#plant-pathogens
#community structure
#recombination
|
|
0
|
|
A Wolbachia coinfection in the common bed bug.
(academic.oup.com)
|
Davis HE
…
Parker BJ
ISME Communications
2026-01-01
|
#wolbachia
#symbiosis
#metagenomics
#cytoplasmic incompatibility
#arthropod
|
|
0
|
|
The larval gut as a mirror: bacterial community composition and functional potential of mayfly larvae reflect site and seasonality differences.
(academic.oup.com)
|
Martinez-Cuesta R
…
Schulz S
ISME Communications
2026-01-01
|
#microbiome
#metagenomics
#freshwater
#biodiversity
#ecology
|
|
0
|
|
From CRISPR-Cas to Argonautes: Defense systems of bacteria and archaea in the hydrothermal deep subsurface.
(academic.oup.com)
|
Su L
…
Teske A
ISME Communications
2026-01-01
|
#crispr
#defense
#metagenomics
#extremophiles
#viromics
|
|
0
|
|
Phycosphere microbiome contributes to ecological dominance of diatoms: a comparative study of Cyclotella atomus and Ulnaria ulna.
(academic.oup.com)
|
Song G
…
Bi Y
ISME Communications
2026-01-01
|
#microbiome
#metagenomics
#symbiosis
#ecology
#sequencing
|
|
0
|
|
BileActome reveals community-assembled bile acid metabolism in the rumen microbiome.
(academic.oup.com)
|
Zhang B
…
Wang B
ISME Communications
2026-01-01
|
#metagenomics
#microbiome
#metabolism
#annotation
#rumen
|
|
0
|
|
Viral lysis and host reprogramming impact carbohydrate, amino acid, and osmolyte cycling in salt-marsh tidal creek sediments.
(academic.oup.com)
|
Frizzo R
…
Venier P
ISME Communications
2026-01-01
|
#metagenomics
#viromics
#biogeochemistry
#sediment
#metabolic modeling
|
|
0
|
|
Unexpected novel clade III type nitrous oxide-reducing bacteria from incubated lake sediments.
(academic.oup.com)
|
Wang S
…
Wu F
ISME Communications
2026-01-01
|
#metagenomics
#denitrification
#microbiome
#nitrogen
|
|
0
|
|
Active microbial communities and their extrachromosomal elements link organic matter degradation to methane cycling in anoxic sediments.
(academic.oup.com)
|
Dede B
…
Schoelmerich MC
ISME Communications
2026-01-01
|
#metagenomics
#metatranscriptomics
#methanogenesis
#sediment
#microbiome
|
|
0
|
|
Antimicrobial resistance as a signature of soil restoration across a 143-year chronosequence.
(academic.oup.com)
|
Goodall T
…
Busi SB
ISME Communications
2026-01-01
|
#amr
#microbiome
#soil
#metagenomics
#restoration
|
|
0
|
|
Contrasting associations between microbiota respiratory strategies and seafloor macrofauna.
(academic.oup.com)
|
Rudi K
…
Snipen LG
ISME Communications
2026-01-01
|
#metagenomics
#microbiome
#benthic
#respiration
|
|
0
|
|
Seasonal connectivity of microbes and carbohydrates between ocean, atmosphere, and cryosphere in Kongsfjorden (Svalbard, Arctic Ocean).
(academic.oup.com)
|
Wietz M
…
Zeppenfeld S
ISME Communications
2026-01-01
|
#microbiome
#aerosol
#metagenomics
#seasonality
#arctic
|
|
0
|
|
Seagrass-derived carbon suppresses nitrification and N(2)O emissions by Comammox and canonical nitrifier communities.
(academic.oup.com)
|
Su R
…
He Z
ISME Communications
2026-01-01
|
#nitrification
#metagenomics
#metatranscriptomics
#biogeochemistry
#microbiome
|
|
0
|
|
SIPdb: a stable isotope probing database and analytical dashboard for linking amplicon sequences to microbial activity using reverse ecology.
(academic.oup.com)
|
Trentin AB
…
Wilhelm RC
ISME Communications
2026-01-01
|
#isotope probing
#metagenomics
#database
#microbiome
#metabolism
|
|
0
|
|
Contrasts in niche breadth and its drivers between soil microbes and plants in alpine grasslands.
(academic.oup.com)
|
Chen L
…
Adams JM
ISME Communications
2026-01-01
|
#microbiome
#ecology
#metagenomics
#community
#elevation
|
|
0
|
|
Significant impact of threshold adjustments on microbiome characterization following Nanopore sequencing.
(academic.oup.com)
|
Fu M
…
Choe JC
ISME Communications
2026-01-01
|
#sequencing
#microbiome
#metagenomics
#taxonomy
|
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0
|
|
Integrating metagenome-scale metabolic models and metabolomics to explore candidate biochemical interactions in cultivated Microcystis phycospheres.
(academic.oup.com)
|
Audemard J
…
Frioux C
ISME Communications
2026-01-01
|
#metagenomics
#metabolomics
#microbiome
#cyanobacteria
#toxicity
|
|
0
|
|
Characterization of the atmospheric microbiome in a semi-rural area of Central Europe using flow cytometry.
(academic.oup.com)
|
Abboud E
…
Violaki K
ISME Communications
2026-01-01
|
#microbiome
#aerosols
#metagenomics
#cytometry
|
|
0
|
|
Faecalibacterium harmsenii sp. nov., an abundant but previously overlooked Faecalibacterium in the human gut.
(academic.oup.com)
|
Pan Q
…
van Dijl JM
ISME Communications
2026-01-01
|
#microbiome
#metagenomics
#taxonomy
#carbohydrate-metabolism
|
|
0
|
|
Chlorophyll a gradients shift heterotrophic bacterial assembly from dispersal limitation to biotic filtering of picophytoplankton.
(academic.oup.com)
|
Chen PY
…
Yeh YC
ISME Communications
2026-01-01
|
#marine
#microbiome
#community assembly
#metagenomics
#picophytoplankton
|
|
0
|
|
Oil composition determines microbial preference for carbon source between hydrocarbons and Necromass in water droplets within crude shale oil.
(academic.oup.com)
|
Wang QH
…
Mu BZ
ISME Communications
2026-01-01
|
#metagenomics
#hydrocarbon
#microbiome
#metabolomics
#bioremediation
|
|
0
|
|
Boreal and subarctic freshwaters harbour a diversity of jumbophages.
(academic.oup.com)
|
Niemi M
…
Laanto E
ISME Communications
2026-01-01
|
#bacteriophage
#freshwater
#metagenomics
#microbiome
#genomics
|
|
0
|
|
Gut microbiomics reveals host-microbe crosstalk during sexual differentiation in the shortfin eel Anguilla bicolor.
(academic.oup.com)
|
Brandon-Mong GJ
…
Chiang YR
ISME Communications
2026-01-01
|
#microbiome
#metagenomics
#metabolism
#steroid
|
|
0
|
|
Dispersal pathways and infection strategies within the Global Halophilic Virome.
(academic.oup.com)
|
Aldeguer-Riquelme B
…
Anton J
ISME Communications
2026-01-01
|
#virome
#metagenomics
#biogeography
#acidophilic
#dispersal
|
|
0
|
|
Iron stimulates greenhouse gas production in Southeast Asian peatlands.
(academic.oup.com)
|
Laloo AE
…
Swarup S
ISME Communications
2026-01-01
|
#metagenomics
#peatlands
#biogeochemistry
#methanogenesis
#microbiome
|
|
0
|
|
The illusion of functional stability: functional redundancy does not equal functional insurance in a natural-engineered aquatic continuum.
(academic.oup.com)
|
Tang Q
…
Lu L
ISME Communications
2026-01-01
|
#metagenomics
#metatranscriptomics
#microbiome
#ecosystem
#redundancy
|
|
0
|
|
Stage-specific cyanobacterial handoffs and heterotrophic subsidies underpin biocrust carbon accumulation.
(academic.oup.com)
|
Zhang X
…
Hu C
ISME Communications
2026-01-01
|
#metagenomics
#microbiome
#metatranscriptomics
#biofilm
#cyanobacteria
|
|
0
|
|
Phylogeny-guided curation reveals widespread misannotation of Asgard archaeal 16S rRNA gene sequences in public databases.
(academic.oup.com)
|
Struillou A
…
Lopez-Garcia P
ISME Communications
2026-01-01
|
#taxonomy
#16s
#metagenomics
#archaea
#curation
|
|
0
|
|
Positive effects of reduced tillage intensity on soil organic matter are linked to shifts of K-/r-strategists in soil bacterial community composition.
(academic.oup.com)
|
Raab M
…
Kampouris ID
ISME Communications
2026-01-01
|
#metagenomics
#microbiome
#soil
#16s
#metabolism
|
|
0
|
|
Quorum-sensing microbial dark matter enables core functions in wastewater microbiomes.
(academic.oup.com)
|
Liu Q
…
Wang J
ISME Communications
2026-01-01
|
#metagenomics
#quorum sensing
#wastewater
#microbiome
#biofilm
|
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0
|
|
Global in silico analysis reveals a core gut microbiota in fall armyworm (Spodoptera frugiperda) shaped by geography and diet.
(academic.oup.com)
|
Anand L
…
Corbin KR
ISME Communications
2026-01-01
|
#microbiome
#metagenomics
#16s
#pest
#detoxification
|
|
0
|
|
Carbohydrate-active enzyme architectures reflect distinct fungal and bacterial strategies for lignocellulose conversion to volatile fatty acids.
(academic.oup.com)
|
Lawson CE
…
O'Malley MA
ISME Communications
2026-01-01
|
#metagenomics
#lignocellulose
#fermentation
#metatranscriptomics
#anaerobic
|
|
0
|
|
Temperate versus virulent phage lifestyle impacts microdiversity in soil environments.
(academic.oup.com)
|
de Bruijn TEP
…
Kupczok A
ISME Communications
2026-01-01
|
#viromics
#phage
#microdiversity
#metagenomics
#coevolution
|
|
0
|
|
Urban effluents override drying legacy in stream biofilm bacterial communities.
(academic.oup.com)
|
Ortiz-Rivero J
…
Freixa A
ISME Communications
2026-01-01
|
#biofilm
#metagenomics
#microbiome
#pollution
#ecology
|
|
0
|
|
To cohabit or inoculate? Testing the limits of microbiota transplantation in Manila clams.
(academic.oup.com)
|
Monticelli G
…
Milan M
ISME Communications
2026-01-01
|
#microbiota
#transplantation
#metagenomics
#bivalves
|
|
0
|
|
Genome-resolved metagenomics reveals rare taxa and functional traits in two contrasting agricultural fields.
(academic.oup.com)
|
Chatzigiannidou I
…
Kristiansen K
ISME Communications
2026-01-01
|
#metagenomics
#microbiome
#soil
#nitrogen cycling
#agriculture
|
|
0
|
|
Compost application more strongly shapes soil fungal than bacterial communities across arable fields.
(academic.oup.com)
|
Walder F
…
van der Heijden MGA
ISME Communications
2026-01-01
|
#microbiome
#soil
#metagenomics
#agriculture
#community composition
|
|
0
|
|
Comparative genomics of the Smithellaceae: reductive evolution and a mobile alkane-activation module in Smithella.
(academic.oup.com)
|
Tan B
…
Ng C
ISME Communications
2026-01-01
|
#comparative genomics
#metagenomics
#alkane
#metabolic-evolution
#microbiome
|
|
0
|
|
Markers of resilience to stony coral tissue loss disease and putative probiotic functions in the microbiomes of the coral, Orbicella faveolata.
(academic.oup.com)
|
Becker CC
…
Meyer JL
ISME Communications
2026-01-01
|
#microbiome
#metagenomics
#disease
#coral
#probiotic
|