|
0
|
|
ClusterGraph: a new tool for visualisation and compression of multidimensional data.
(academic.oup.com)
|
Dlotko P
…
Jurek-Loughrey A
GigaScience
2026-06-13
|
#clustering
#visualization
#dimensionality reduction
|
|
0
|
|
GBSC: Graph-Based Sequence Clustering method for similar short tandem repeats in protein sequences.
(academic.oup.com)
|
Jarnot P
…
Gruca A
Bioinformatics
2026-06-13
|
#clustering
#protein
#sequence
#algorithm
|
|
0
|
|
spAttClu: A spatial domain clustering model lev-eraging spatially-weighted graph attention and contrastive learning.
(academic.oup.com)
|
Zhang T
…
Wang G
Bioinformatics
2026-06-13
|
#transcriptomics
#clustering
#heterogeneity
#tissue
|
|
0
|
|
A structural backbone with sequestered plasticity organizes the Escherichia coli pangenome.
(journals.asm.org)
|
Lu Y-F
…
Zhi X-Y
mSystems
2026-06-15
|
#pangenome
#orthogroups
#synteny
#clustering
#genomic islands
|
|
0
|
|
SECTOR: structural entropy-based learning of spatiotemporal organisation in spatial transcriptomics.
(academic.oup.com)
|
Huang L
…
Chen D
Bioinformatics
2026-06-15
|
#transcriptomics
#clustering
#pseudotime
#modeling
|
|
0
|
|
Phylogenetic tree inference from single-cell RNA sequencing data with SCITE-RNA.
(link.springer.com)
|
Zimmermann N
…
Beerenwinkel N
Genome Biology
2026-06-15
|
#phylogenomics
#transcriptomics
#cancer
#clustering
|
|
0
|
|
barbieQ: an R software package for analysing barcode count data from clonal tracking experiments.
(academic.oup.com)
|
Fei L
…
Oshlack A
Bioinformatics
2026-06-16
|
#clustering
#sequencing
#barcode
#lineage
#statistical
|
|
0
|
|
Proteomic health archetypes identified in disease-free adults enable risk assessment for diverse chronic diseases.
(link.springer.com)
|
Zhang X
…
Zhu J
Genome Medicine
2026-06-16
|
#proteomics
#clustering
#risk assessment
#biomarker
#modeling
|
|
0
|
|
Praxis-BGM: Clustering of Omics Data Using Semi-Supervised Transfer Learning for Gaussian Mixture Models via Natural-Gradient Variational Inference.
(academic.oup.com)
|
Jia Q
…
Conti DV
Bioinformatics
2026-06-17
|
#clustering
#transcriptomics
#modeling
#transfer learning
|
|
0
|
|
UnionLoops: a workflow for calling chromatin loops across related Hi-C datasets with improved specificity, precision, and sensitivity.
(link.springer.com)
|
Liu J
…
Dekker J
Genome Biology
2026-06-20
|
#chromatin
#clustering
#modeling
|
|
0
|
|
Spatially informed reference-free cell-type deconvolution for spatial transcriptomics with SpatialCD.
(genome.cshlp.org)
|
Vo P
…
Cui Y
Genome Research
2026-06-22
|
#transcriptomics
#deconvolution
#clustering
#modeling
|
|
0
|
|
Reference-informed spatial domain detection using weak supervision for spatial transcriptomics.
(genome.cshlp.org)
|
Ma X
…
Chen L
Genome Research
2026-06-22
|
#transcriptomics
#segmentation
#clustering
#machine learning
|
|
0
|
|
CycleVI: Isolating cell cycle variation with an interpretable deep generative model.
(academic.oup.com)
|
Mozdzanowski P
…
Jeuken GS
Bioinformatics
2026-06-23
|
#transcriptomics
#modeling
#cell cycle
#clustering
|
|
0
|
|
Diffusion-based representation integration for foundation models improves spatial transcriptomics analysis.
(academic.oup.com)
|
Jain A
…
Singh R
Bioinformatics
2026-07-01
|
#transcriptomics
#clustering
#embedding
#annotation
|
|
0
|
|
ADAMIXTURE: adaptive first-order optimization for biobank-scale genetic clustering.
(academic.oup.com)
|
Saurina-I-Ricos J
…
Ioannidis AG
Bioinformatics
2026-07-01
|
#clustering
#genetics
#optimization
#admixture
|
|
0
|
|
MCFST: Spatial domain identification method based on multi-view graph convolutional network and graph fusion network.
(academic.oup.com)
|
Zhang Z
…
Gao X
Bioinformatics
2026-07-03
|
#transcriptomics
#clustering
#graph-neural-networks
#tissue
|
|
0
|
|
TopoMetry systematically learns and evaluates the latent geometry of single-cell data.
(elifesciences.org)
|
Sidarta-Oliveira D
…
Velloso LA
eLife
2026-07-03
|
#transcriptomics
#single-cell
#clustering
#visualization
|
|
0
|
|
Structural-information Guided Fusion for spatial domain identification from Spatial Transcriptomics.
(academic.oup.com)
|
Zhang M
…
Feng S
Bioinformatics
2026-07-09
|
#transcriptomics
#clustering
#tissue
|
|
0
|
|
Provable cluster-preserving visualizations with curvature-based stochastic neighbor embeddings.
(pnas.org)
|
Saidi TL
…
Blumberg AJ
PNAS
2026-07-10
|
#visualization
#dimensionality reduction
#clustering
#geometry
|