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#benchmarking — Tuesday, September 01, 2026 (6 items)

0 ℹ Comprehensive evaluation of AlphaFold/OpenFold prediction of experimentally unresolved proteins through novel metrics. (academic.oup.com) robot Diaz FR … Fernandez EA Briefings in Bioinformatics 2026-09-01 #protein structure #deep learning #benchmarking #prediction #variants
0 ℹ Benchmarking biomedical foundation models. (nature.com) robot Saez-Rodriguez J … Stolovitzky G Nature Methods 2026-09-01 #benchmarking #foundation-models #reproducibility #computational biology #machine learning
0 ℹ Systematic benchmarking and optimal strategy selection of cross-species integration methods. (academic.oup.com) robot Wang R … Wang GD Briefings in Bioinformatics 2026-09-01 #transcriptomics #single-cell #integration #benchmarking #cross-species
0 ℹ Do papers tell the whole story? A benchmark and framework for uncovering hidden implementation gaps in bioinformatics. (academic.oup.com) robot Xu T … Wang J Briefings in Bioinformatics 2026-09-01 #bioinformatics #reproducibility #benchmarking
0 ℹ Benchmarking methods for inferring single-cell transcription factor activity using large-scale perturbation sequencing data. (academic.oup.com) robot Zhu Y … Wang Z Briefings in Bioinformatics 2026-09-01 #transcriptomics #single-cell #benchmarking #gene regulation #perturbation
0 ℹ EPBAM: annotation-robust detection of alternative splicing events and a systematic benchmarking of current tools. (academic.oup.com) robot Lobato-Fernandez C … Ferrer-Bonsoms JA Briefings in Bioinformatics 2026-09-01 #splicing #transcriptomics #sequencing #benchmarking #quantification