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MetaStrainer: accurate reconstruction of bacterial strain genotypes from short-read metagenomic samples.
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Sharaf H
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microntology: a lightweight, data-driven controlled vocabulary to describe earth's microbial habitats.
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Fullam A
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Wu L
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Nature
2026-06-01
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Cayman enables large-scale analysis of gut microbiome carbohydrate-active enzyme repertoires.
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Nature Microbiology
2026-06-01
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Strain-level transmission inference across multi-kingdom metagenomic data using TRACS.
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Tonkin-Hill G
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Nature Microbiology
2026-06-01
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Diversity, ecology, cell biology and evolution of the Asgard archaea.
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Panagiotou K
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Nature Reviews Microbiology
2026-06-01
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Microbiome research in practice: priorities for clinical translation and impact.
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Theodosiou AA
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Clinical Microbiology and Infection
2026-06-01
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Uncovering the Community Structure and Adaptive Characteristics of Soil Protists Across Natural, Semi-Natural and Highly Degraded Habitats.
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Feng SW
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Environmental Microbiology
2026-06-01
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Comprehensive taxonomic identification of microbial species in metagenomic data using SingleM and Sandpiper.
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Woodcroft BJ
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Nature Biotechnology
2026-06-01
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Microbiome signature of Parkinson's disease in healthy and genetically at-risk individuals.
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Menozzi E
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Nature Medicine
2026-06-01
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Long-Term Effects of Straw-Biochar Application and Fertilization Gradients on Black Soil Carbon Sequestration via Prokaryote-Fungus-Protist Interactions and Metagenomic-Metabolite Linkages.
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Jiang Y
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Environmental Microbiology
2026-06-01
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Forces Shaping Diversity of Hydrogen Peroxide Detoxification Potential in Ocean Microbial Ecosystems.
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Goldberg H
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Environmental Microbiology
2026-06-01
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Health benefits of a five-day at-home modified fasting program: a randomised controlled trial.
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Grundler F
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Genome Medicine
2026-06-01
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Sulfated bile acid produced by a human gut commensal alleviates paediatric sepsis in mice.
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Liu X
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Ning K
Nature Microbiology
2026-06-01
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#sepsis
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MetaNet: a scalable and integrated tool for reproducible omics network analysis.
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Peng C
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Bioinformatics
2026-06-01
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#network analysis
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Mapping the soil microbiome functions shaping wetland methane emissions.
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Borton MA
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mSystems
2026-06-01
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Application of Nano Silica Is Associated With Enhanced Wheat Resistance to Fusarium Crown Rot via Regulation of Metabolic Pathways and Soil Microbial Community.
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Zhu P
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Shi Y
Environmental Microbiology
2026-06-01
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Influence of Human Activities on Bacterial and Fungal Communities in Urban Rivers.
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Yang Q
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Environmental Microbiology
2026-06-01
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0
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Predator avoidance promotes inter-bacterial symbiosis with myxobacteria in polymicrobial communities.
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Pokharel SK
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Stevens DC
The ISME Journal
2026-06-01
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Rare Worlds, Rare Microbes-From Salt Flats and Tropical Glaciers to Volcanoes and Andean Deserts as Natural Laboratories for Microbial Biotechnology in Latin America.
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Guzman D
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Batista-Garcia RA
Environmental Microbiology
2026-06-01
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#extremophiles
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0
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Host Ecology Shapes Gut Pathogen Evolution: An Eco-Evolutionary Trade-Off in Plateau Wildlife.
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Wang Y
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Li H
Environmental Microbiology
2026-06-01
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#metagenomics
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0
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Minimally Disturbed Tropical Soils Harbour Diverse Clostridioides Genomospecies With Mosaic Population Structures, Functional TcdB homologues, and Clinically Relevant Resistomes.
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Bolanos MP
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Rodriguez C
Environmental Microbiology
2026-06-01
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0
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Succession and Functional Adaptation of Bacterial and Fungal Communities in Biological Soil Crusts Responding to Uranium Stress.
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Han M
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Xi H
Environmental Microbiology
2026-06-01
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#metagenomics
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