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0
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scSuperAnnotator: a platform for benchmarking comparison and visualizing automated cellular annotation methods for scRNA-seq data.
(academic.oup.com)
|
Qi Q
…
Li X
Nucleic Acids Research
2026-01-05
|
#transcriptomics
#sequencing
#clustering
#annotation
|
|
0
|
|
Recognition of unnatural base pairs by a eukaryotic DNA polymerase enables universal sequencing of an expanded genetic alphabet.
(academic.oup.com)
|
Luo H
…
Chen T
Nucleic Acids Research
2026-01-05
|
#sequencing
#synthetic biology
#mutagenesis
#dna replication
|
|
0
|
|
Genome-wide nucleosome and transcription factor responses to genetic perturbations reveal chromatin-mediated mechanisms of transcriptional regulation.
(genome.cshlp.org)
|
Moyung K
…
MacAlpine DM
Genome Research
2026-01-05
|
#chromatin
#transcription
#sequencing
#regulation
|
|
0
|
|
Automated chromatin profiling with spa-ChIP-seq uncovers the impacts of condition variations.
(genome.cshlp.org)
|
Cao Y
…
Goren A
Genome Research
2026-01-05
|
#chromatin
#sequencing
#reproducibility
#automation
#protocol
|
|
0
|
|
Accurate chromatin marks peak calling with Omnipeak.
(academic.oup.com)
|
Shpynov O
…
Artyomov MN
Nucleic Acids Research
2026-01-05
|
#modeling
#chromatin
#transcription
#sequencing
|
|
0
|
|
Strong bias in long-read sequencing prevents assembly of Drosophila melanogaster Y-linked genes.
(genome.cshlp.org)
|
Carvalho AB
…
Uno F
Genome Research
2026-01-05
|
#assembly
#sequencing
#bias
#long-reads
|
|
0
|
|
A versatile type VI CRISPR-based approach for targeted m(6)A demethylation in mRNAs.
(genome.cshlp.org)
|
Adamopoulos PG
…
Scorilas A
Genome Research
2026-01-05
|
#sequencing
#crispr
#epigenomics
#demethylation
|
|
0
|
|
SVCROWS: a user-defined tool for interpreting significant structural variants in heterogeneous datasets.
(academic.oup.com)
|
Brown N
…
Guler JL
Nucleic Acids Research
2026-01-05
|
#assembly
#sequencing
#clustering
#structural variation
|
|
0
|
|
Replication stress increases de novo CNVs across the malaria parasite genome.
(academic.oup.com)
|
Brown N
…
Guler JL
Nucleic Acids Research
2026-01-05
|
#genomics
#amr
#malaria
#sequencing
#cnv
|
|
0
|
|
Accurate detection of somatic single-nucleotide variants from bulk RNA-seq data using RNA-MosaicHunter.
(academic.oup.com)
|
Huang AY
…
Lee EA
Nucleic Acids Research
2026-01-05
|
#transcriptomics
#aging
#sequencing
#neurodegeneration
#variant detection
|
|
0
|
|
Modest increase in the de novo single-nucleotide mutation rate in house mice born by assisted reproduction.
(genome.cshlp.org)
|
Blanco-Berdugo L
…
Dumont BL
Genome Research
2026-01-05
|
#sequencing
#mutagenesis
#reproduction
#germline
|
|
0
|
|
Genome-wide maps of CPD deamination in yeast reveal the impact of DNA sequence context and nucleosome architecture on cytosine deamination rates.
(genome.cshlp.org)
|
Laughery MF
…
Wyrick JJ
Genome Research
2026-01-05
|
#chromatin
#sequencing
#mutagenesis
#dna damage
|