#embeddings — top 20, last 30d
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OTalign: Optimal Transport Alignment for Remote Protein Homologs Using Protein Language Model Embeddings.
(academic.oup.com)
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Bioinformatics 2026-06-30 | #alignment #proteins #homology #embeddings #optimization | |
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GATSBI: improving context-aware protein embeddings through biologically motivated data splits.
(academic.oup.com)
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Bioinformatics 2026-07-01 | #embeddings #protein-interactions #graph-neural-networks #function prediction | |
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Is a Win-Win possible? Achieving pareto-optimal privacy-utility balance in fine-tuned genome language model embeddings against embedding reconstruction attacks.
(academic.oup.com)
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Bioinformatics 2026-07-01 | #privacy #embeddings #language-models #genomics |