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Oct 05
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#benchmarking
— top 20, last 30d
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10
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Inferring binding specificities of human transcription factors with the wisdom of crowds.
(linkinghub.elsevier.com)
Gryzunov N
…
Kulakovskiy IV
Cell Reports
2026-10-09
#transcription
#motif
#machine learning
#benchmarking
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7
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Comparative performance of reference-based metagenomic tools to identify species-level taxa among families of bacteria: benchmarking Mycobacteriaceae and Neisseriaceae.
(journals.asm.org)
Harrison LB
…
Veyrier FJ
mSystems
2026-10-09
#metagenomics
#benchmarking
#taxonomy
#sequencing
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3
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RandomReadsMG: Rapid, realistic metagenome simulation at terabase scale for benchmarking and experimental design.
(linkinghub.elsevier.com)
Bushnell B
…
Villada JC
Cell Genomics
2026-10-05
#metagenomics
#sequencing
#simulation
#bioinformatics
#benchmarking
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1
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Deep learning perturbation models can outperform baselines on calibrated metrics.
(nature.com)
Miller HE
…
de Lima Camillo LP
Nature Biotechnology
2026-10-01
#perturbation
#deeplearning
#benchmarking
#genetics
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0
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Experimental benchmarking remains crucial to the interpretation of sequence annotation data.
(journals.asm.org)
Palmer CM
mSystems
2026-09-29
#benchmarking
#annotation
#biosynthesis
#computational
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0
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Structural Variant benchmarking frameworks: Parameterization, matching logic, and evaluation assumptions presented through HG002 and NA12878.
(journals.plos.org)
Maden G
…
Aydin N
PLOS Computational Biology
2026-09-23
#benchmarking
#structural variation
#sequencing
#genomics
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0
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Benchmarking immunoinformatic repertoire assemblies from bulk RNA-seq and PCR-based V(D)J sequencing using PCR-free SMRT RNA sequencing.
(linkinghub.elsevier.com)
Genebrier S
…
Cogne M
iScience
2026-09-15
#sequencing
#immunoglobulin
#repertoire
#benchmarking
#b-cells