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0
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MAAMOUL: metabolic network-based discovery of microbiome-metabolome shifts in disease.
(academic.oup.com)
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Muller E
…
Borenstein E
Bioinformatics
2026-08-01
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#metagenomics
#metabolomics
#microbiome
#ibd
#metabolism
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0
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GiantHost: a domain-adaptive and uncertainty-aware framework for giant virus host prediction.
(academic.oup.com)
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Qu F
…
Sun Y
Bioinformatics
2026-08-01
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#metagenomics
#virology
#machine learning
#host-prediction
#domain adaptation
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0
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Metagenomic Insights Into Red Sea Biodiversity Across the Web of Life.
(sfamjournals.onlinelibrary.wiley.com)
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Laiolo E
…
Duarte CM
Environmental Microbiology
2026-08-01
|
#metagenomics
#microbiome
#biodiversity
#sequencing
#marine
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0
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theBIGbam: compression and interactive exploration of large-scale sequencing alignments with circular mapping support.
(academic.oup.com)
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Boutroux M
…
Peter H
Bioinformatics
2026-08-01
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#metagenomics
#sequencing
#visualization
#alignment
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0
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Emergent function, not microbial conformity: functional redundancy and the limits of taxonomic inference in microbiome genomics.
(microbiologyresearch.org)
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Lewandowski R
Microbial Genomics
2026-08-01
|
#metagenomics
#microbiome
#functional-redundancy
#metatranscriptomics
#taxonomy
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0
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An ode to the 16S rRNA gene: its history, importance, caveats and future in microbiome research.
(microbiologyresearch.org)
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Whelan FJ
…
Hall LJ
Microbial Genomics
2026-08-01
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#microbiome
#sequencing
#metagenomics
#taxonomy
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0
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Comprehensive Pathogen Spectrum Analysis Using mNGS in AIDS Patients With Pulmonary Infections: Diagnostic Value and Clinical Implications.
(academic.oup.com)
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Liang W
…
Hongxin Z
Open Forum Infectious Diseases
2026-08-01
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#metagenomics
#immunodeficiency
#infection
#diagnostics
#respiratory
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0
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De novo assembly and authentication of ancient DNA metagenomes with nf-core/mag.
(journals.plos.org)
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Fellows Yates JA
…
Warinner C
PLOS Computational Biology
2026-08-01
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#metagenomics
#paleogenomics
#assembly
#microbiome
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0
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Spatial Partitioning of Microbial Functional Potential Suggests Complex Nitrogen Cycling in a Subterranean Estuary.
(sfamjournals.onlinelibrary.wiley.com)
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Romano-Gude D
…
Ruiz-Gonzalez C
Environmental Microbiology
2026-08-01
|
#nitrogen cycling
#metagenomics
#microbiome
#groundwater
#denitrification
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0
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TPMM: three-component posterior mixture model enables robust inverton detection in low-depth metagenomes and suggests potential viral invertons.
(academic.oup.com)
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Lu Y
…
Sun Y
Bioinformatics
2026-08-01
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#metagenomics
#invertons
#sequencing
#phase variation
#bayesian
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0
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ViralQC: a tool for assessing completeness and contamination of predicted viral contigs.
(academic.oup.com)
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Peng C
…
Sun Y
Bioinformatics
2026-08-01
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#metagenomics
#virology
#sequencing
#quality control
#contamination
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0
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From Genes to Greens: How Diet, Climate and Phylogeny Shape Freshwater Turtle Microbiotas.
(sfamjournals.onlinelibrary.wiley.com)
|
Scheelings TF
…
Moore RJ
Environmental Microbiology
2026-08-01
|
#microbiome
#metagenomics
#ecology
#phylosymbiosis
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0
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Predicting the plastic biodegradation potential within microbial lineages and across global ecosystems.
(microbiologyresearch.org)
|
Douwes H
…
Rinke C
Microbial Genomics
2026-08-01
|
#metagenomics
#biodegradation
#enzymes
#microbiome
#pollution
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0
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Optimized Controlled-Release Fertilization Improves Productivity and Reshapes the Rhizosphere Microbiome in Lei Bamboo: A Metagenomic Assessment.
(sfamjournals.onlinelibrary.wiley.com)
|
Yang Z
…
Ahmad Z
Environmental Microbiology
2026-08-01
|
#metagenomics
#microbiome
#rhizosphere
#nitrogen
#agriculture
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0
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Stop codon reassignment to tryptophan in members of the bacterial phylum Actinomycetota.
(microbiologyresearch.org)
|
Parks DH
…
Hugenholtz P
Microbial Genomics
2026-08-01
|
#metagenomics
#recoding
#symbiosis
#microbiome
#genomics
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0
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Hydrological Regime Shifts Reshape Assembly Dynamics of Multi-Trophic Microbial Communities in Pumping Station Forebays.
(sfamjournals.onlinelibrary.wiley.com)
|
Song W
…
Wei X
Environmental Microbiology
2026-08-01
|
#microbiome
#metagenomics
#community assembly
#aquatic
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0
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|
A spectrum of gut microbiota signatures predicts long-term health status.
(academic.oup.com)
|
Lindgren H
…
Lahti L
Bioinformatics
2026-08-01
|
#microbiome
#dysbiosis
#prognosis
#metagenomics
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0
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|
Adaptation of Soil Viruses to Salinity Stress: Insights Into Genome Size Expansion and Functional Diversification.
(sfamjournals.onlinelibrary.wiley.com)
|
Kudureti A
…
Tian CY
Environmental Microbiology
2026-08-01
|
#metagenomics
#virome
#salinity
#amg
#adaptation
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0
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|
Denitrification Modularity and Its Environmental Controls in Transiently Versus Permanently Anoxic Marine Systems.
(sfamjournals.onlinelibrary.wiley.com)
|
Hexter JC
…
Ward BB
Environmental Microbiology
2026-08-01
|
#metagenomics
#denitrification
#microbiome
#anoxia
#biogeochemistry
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0
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|
Detection of a novel Shamonda Orthobunyavirus in dairy cattle, France, June 2026.
(eurosurveillance.org)
|
Kelleci M
…
Guerin JL
Eurosurveillance
2026-08-01
|
#metagenomics
#virology
#emergence
#animal-models
#surveillance
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0
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|
RSHash: a fast and space-efficient hash table for k-mers.
(academic.oup.com)
|
Schulte-Mattler J
…
Reinert K
Bioinformatics
2026-08-01
|
#sequencing
#indexing
#metagenomics
#genomics
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0
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|
The multi-omics fallacy in microbiome science.
(journals.plos.org)
|
Lewandowski R
PLOS Computational Biology
2026-08-01
|
#microbiome
#multi-omics
#machine learning
#metagenomics
#methodology
|