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0
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Microbiome and resistome successions in pig carcasses and fresh pork meat throughout slaughtering, processing and shelf-life.
(link.springer.com)
|
Fernandez-Trapote E
…
Alvarez-Ordonez A
Microbiome
2026-01-21
|
#microbiome
#amr
#metagenomics
#assembly
#contamination
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0
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HVRLocator: a computationally efficient tool for identifying hypervariable regions in large 16S rRNA datasets.
(academic.oup.com)
|
Arboleda-Baena C
…
Jurburg SD
GigaScience
2026-01-21
|
#microbiome
#metagenomics
#sequencing
#clustering
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0
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Enhanced semantic classification of microbiome sample origins using large language models (LLMs).
(academic.oup.com)
|
Gaio D
…
von Mering C
GigaScience
2026-01-21
|
#microbiome
#metagenomics
#machine learning
#classification
#metadata
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0
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nf-core/proteinfamilies: a scalable pipeline for the generation of protein families.
(academic.oup.com)
|
Karatzas E
…
Finn RD
GigaScience
2026-01-21
|
#proteomics
#metagenomics
#phylogenomics
#clustering
#annotation
|
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0
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A comprehensive ruminant microbial catalog (CRMC) reveals convergent selection for key vitamin-synthesizing pathways and genes across ruminants and human.
(academic.oup.com)
|
Feng T
…
Chen WH
GigaScience
2026-01-21
|
#microbiome
#metabolism
#metagenomics
#pangenome
|
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0
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Profound taxonomic and functional gut microbiota alterations associated with trichuriasis: cross-country and country-specific patterns.
(nature.com)
|
Schneeberger PHH
…
Keiser J
npj Biofilms and Microbiomes
2026-01-21
|
#microbiome
#metabolism
#metagenomics
#dysbiosis
#helminth
|
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0
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HYMET: a hybrid metagenomic pipeline for accurate and efficient taxonomic classification.
(academic.oup.com)
|
Silva JM
…
Almeida JR
GigaScience
2026-01-21
|
#microbiome
#metagenomics
#assembly
#classification
#taxonomic
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0
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MADRe: Strain-level metagenomic classification through assembly-driven database reduction.
(academic.oup.com)
|
Lipovac J
…
Krizanovic K
GigaScience
2026-01-21
|
#microbiome
#metagenomics
#assembly
#classification
|
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0
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PathoFact 2.0: an integrative pipeline for the prediction of antimicrobial resistance genes, virulence factors, toxins and toxin-associated proteins, and biosynthetic gene clusters in metagenomes.
(academic.oup.com)
|
Delgado LF
…
Wilmes P
GigaScience
2026-01-21
|
#microbiome
#amr
#virulence
#metagenomics
#biosynthetic
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