|
0
|
|
Microbial collagenase activity is linked to oral-gut translocation in advanced chronic liver disease.
(nature.com)
|
Jin S
…
Schirmer M
Nature Microbiology
2026-01-01
|
#microbiome
#metagenomics
#dysbiosis
#translocation
#virulence
|
|
0
|
|
Persistent virulent phages exist across bacterial isolates.
(nature.com)
|
Dougherty PE
…
Hansen LH
Nature Microbiology
2026-01-01
|
#phage
#assembly
#metagenomics
#infection
#persistence
|
|
0
|
|
Gut microbiome-mediated transformation of dietary phytonutrients is associated with health outcomes.
(nature.com)
|
Zhang L
…
Panagiotou G
Nature Microbiology
2026-01-01
|
#microbiome
#metabolism
#metagenomics
#metatranscriptomics
#inflammation
|
|
0
|
|
A human gut metagenome-assembled genome catalogue spanning 41 countries supports genome-scale metabolic models.
(nature.com)
|
Ma J
…
Lee I
Nature Microbiology
2026-01-01
|
#metagenomics
#microbiome
#metabolism
#assembly
#amr
|
|
0
|
|
Phage-microbe interactions may contribute to the population structure and dynamics of hydrothermal vent symbionts.
(academic.oup.com)
|
Hauer MA
…
Beinart RA
ISME Communications
2026-01-01
|
#phage
#symbiosis
#metagenomics
#crispr
#chemosynthesis
|
|
0
|
|
Cultivation and genomic characterization of novel methanogens from arid desert biocrust.
(academic.oup.com)
|
Tian W
…
Angel R
ISME Communications
2026-01-01
|
#cultivation
#phylogenomics
#pangenome
#metagenomics
#metabolism
|
|
0
|
|
Functional redundancy and metabolic flexibility of microbial communities in two Mid-Atlantic bays.
(academic.oup.com)
|
John J
…
Campbell BJ
ISME Communications
2026-01-01
|
#metagenomics
#metatranscriptomics
#microbiome
#metabolism
#estuarine
|
|
0
|
|
Spatial structuring of root-associated bacteria and metabolic landscapes in an endangered cliffside conifer Thuja sutchuenensis Franch.
(academic.oup.com)
|
Zuo Y
…
Deng H
ISME Communications
2026-01-01
|
#rhizosphere
#microbiome
#metagenomics
#metabolomics
#plant-microbe
|
|
0
|
|
Discovery and genomics of H(2)-oxidizing/O(2)-reducing Deferribacterota ectosymbiotic with protists in the guts of termites and a Cryptocercus cockroach.
(academic.oup.com)
|
Maruoka N
…
Hongoh Y
ISME Communications
2026-01-01
|
#symbiosis
#metagenomics
#microbiome
#metabolism
|
|
0
|
|
The near-zero-magnetic field alters microbial community structure and ecological functions in mangroves.
(academic.oup.com)
|
Meng FY
…
Li M
ISME Communications
2026-01-01
|
#microbiome
#metagenomics
#metabolism
#biogeochemistry
|
|
0
|
|
Microbial Community Metagenomics in the Eastern Tropical North Pacific Oxygen Minimum Zone Reveals Functional Differences Along Biogeochemical Gradients.
(sfamjournals.onlinelibrary.wiley.com)
|
Gutierrez F
…
Beman JM
Environmental Microbiology
2026-01-01
|
#metagenomics
#microbiome
#metabolism
#assembly
#biogeochemistry
|
|
0
|
|
Vertical stratification and functional coupling of antibiotic resistance and carbon metabolism in thermokarst lake sediments.
(academic.oup.com)
|
Ren Z
…
Zhang X
ISME Communications
2026-01-01
|
#amr
#metagenomics
#microbiome
#metabolism
#horizontal transfer
|
|
0
|
|
Spatiotemporal intermittence effect on periphyton microbial communities in a tropical drying river network.
(academic.oup.com)
|
Campana MD
…
Encalada AC
ISME Communications
2026-01-01
|
#metagenomics
#microbiome
#biofilm
#metabolism
#phylogenomics
|
|
0
|
|
The biogeography of soil and airborne fungi in the Southwestern USA in relation to climate and vegetation.
(academic.oup.com)
|
Cat LA
…
Treseder KK
ISME Communications
2026-01-01
|
#metagenomics
#biogeography
#microbiome
#dispersal
#sequencing
|
|
0
|
|
Upwelling periodically disturbs the ecological assembly of microbial communities in Lake Ontario.
(academic.oup.com)
|
Pendleton A
…
Schmidt ML
ISME Communications
2026-01-01
|
#metagenomics
#microbiome
#metabolism
#ecology
|
|
0
|
|
Tracking active heterotrophic microbial communities in the Guaymas Basin deep biosphere with BONCAT-FACS.
(academic.oup.com)
|
Montgomery A
…
Hatzenpichler R
ISME Communications
2026-01-01
|
#metagenomics
#microbiome
#metabolism
#sequencing
#biogeochemistry
|
|
0
|
|
Host plant selects bacterial rhizosphere microbiome function whereas community structure is determined by soil legacy.
(academic.oup.com)
|
Taketani RG
…
Mauchline TH
ISME Communications
2026-01-01
|
#microbiome
#rhizosphere
#metagenomics
#culturomics
#metabolism
|
|
0
|
|
Magnetotactic Bdellovibrionota from a ferruginous spring.
(academic.oup.com)
|
Bergot M
…
Monteil CL
ISME Communications
2026-01-01
|
#magnetotaxis
#metagenomics
#magnetosome
#ultrastructure
#metabolism
|
|
0
|
|
Long-term heating differently impacts diversity and seasonal dynamics of prokaryotes and micro-eukaryotes in Baltic Sea coastal biofilm communities.
(academic.oup.com)
|
Svendsen IK
…
Salis RK
ISME Communications
2026-01-01
|
#biofilm
#microbiome
#metagenomics
#seasonality
#thermal stress
|
|
0
|
|
Geographic and species-specific determinants of rhizosphere microbiome assembly in Theobroma cacao wild populations.
(academic.oup.com)
|
Tejada CJ
…
Caro-Quintero A
ISME Communications
2026-01-01
|
#microbiome
#rhizosphere
#metagenomics
#nitrogen metabolism
#domestication
|
|
0
|
|
Diversity and community structure of aerobic anoxygenic phototrophic bacteria are shaped by the deep chlorophyll maximum.
(academic.oup.com)
|
Gazulla CR
…
Sanchez O
ISME Communications
2026-01-01
|
#metagenomics
#amplicon
#microbiome
#phylogenomics
#sequencing
|
|
0
|
|
Temporal stability and geographical divergence of skin microbiota in a treefrog: insights from microbial communities and volatile secretions.
(academic.oup.com)
|
Chen TY
…
Cui JG
ISME Communications
2026-01-01
|
#microbiome
#metagenomics
#immunity
#metabolism
|
|
0
|
|
Dynamic change patterns of the human gut microbiota-fluctuation, loss-acquisition, and turnover-and their underlying causes.
(academic.oup.com)
|
Zhang W
…
Kan B
ISME Communications
2026-01-01
|
#microbiome
#metagenomics
#dysbiosis
#amr
#colonization
|
|
0
|
|
The microbiome of marine mat-forming cyanobacteria-a microcosm of taxonomic novelty and phototrophic diversity.
(academic.oup.com)
|
Marter P
…
Petersen J
ISME Communications
2026-01-01
|
#metagenomics
#microbiome
#phylogenomics
#assembly
#photosynthesis
|
|
0
|
|
Anaerobic oxidation of methane supports a minimal microbial community in a subsurface biofilm at Ginsburg mud volcano.
(academic.oup.com)
|
Collado C
…
Laso-Perez R
ISME Communications
2026-01-01
|
#metagenomics
#biofilm
#metabolism
#microbiome
#archaea
|
|
0
|
|
An ANIr-based methodology to determine if two sequence-discrete populations are identical and identify cosmopolitan prokaryotic populations.
(academic.oup.com)
|
Conrad RE
…
Konstantinidis KT
ISME Communications
2026-01-01
|
#metagenomics
#phylogenomics
#clustering
#microbiome
|
|
0
|
|
Bridging taxonomic gaps in microbial community profiling with LSTM-generated synthetic full-length 16S rRNA sequences.
(academic.oup.com)
|
Geijo-Fernandez J
…
Garcia-Perez CA
ISME Communications
2026-01-01
|
#metagenomics
#sequencing
#microbiome
#clustering
#modeling
|
|
0
|
|
Subcuticular symbionts of intertidal brittle stars: diversity, host specificity, and functional potential.
(academic.oup.com)
|
Kawano K
…
Nakagawa S
ISME Communications
2026-01-01
|
#symbiosis
#microbiome
#metagenomics
#amplicon sequencing
#host specificity
|
|
0
|
|
Genomic and metagenomic survey of microbial carbonic anhydrase genes reveals novel clades, high diversity, and biome specificity.
(academic.oup.com)
|
Franco MEE
…
U'Ren JM
ISME Communications
2026-01-01
|
#metagenomics
#phylogenomics
#metabolism
#clustering
|
|
0
|
|
Converting relative amplicon abundances to absolute abundances via flow cytometry: metagenomic validation and application to long ocean transects.
(academic.oup.com)
|
Williams NLR
…
Fuhrman JA
ISME Communications
2026-01-01
|
#metagenomics
#amplicon
#microbiome
#quantification
#oceanography
|
|
0
|
|
Toward reproducible pig gut microbiome profiling through standardized methodologies.
(academic.oup.com)
|
Yergaliyev T
…
Camarinha-Silva A
ISME Communications
2026-01-01
|
#metagenomics
#microbiome
#sequencing
#reproducibility
#standardization
|
|
0
|
|
Detecting "invisible" Phytophthora lineages in publicly available sequencing data.
(academic.oup.com)
|
Rosenqvist T
…
Cleary M
ISME Communications
2026-01-01
|
#metagenomics
#assembly
#metabarcoding
#pathogen
|
|
0
|
|
Root traits correlate with crop rhizosphere microbiome diversity independent of legume relatedness.
(academic.oup.com)
|
Stewart JD
…
Weedon JT
ISME Communications
2026-01-01
|
#microbiome
#rhizosphere
#metagenomics
#phylogenomics
#agriculture
|
|
0
|
|
How "pro" are probiotics for wildlife species? Novel data, lack of evidence, and future directions.
(academic.oup.com)
|
Bornbusch SL
…
Muletz-Wolz CR
ISME Communications
2026-01-01
|
#probiotic
#microbiome
#metagenomics
#colonization
#pathogen
|
|
0
|
|
Beyond the core microbiome: endemic bacteria drive functional and microdiversity differences across salamander populations.
(academic.oup.com)
|
Aizpurua O
…
Alberdi A
ISME Communications
2026-01-01
|
#metagenomics
#microbiome
#metabolism
#microdiversity
#assembly
|
|
0
|
|
Metagenomic expansion of Joyebacterota identifies Cavimicrobium, a dominant sulfide-producing lineage in anoxic marine ecosystems.
(academic.oup.com)
|
Chen X
…
Zhang XH
ISME Communications
2026-01-01
|
#metagenomics
#phylogenomics
#metabolism
#microbiome
#sulfur cycling
|
|
0
|
|
The anaerobic digestion microbiome is robust toward variation in the waste activated sludge feed.
(academic.oup.com)
|
Van Landuyt J
…
De Vrieze J
ISME Communications
2026-01-01
|
#metagenomics
#microbiome
#anaerobic digestion
#resilience
#wastewater
|
|
0
|
|
Interpreting UniFrac with absolute abundance: a conceptual and practical guide.
(academic.oup.com)
|
Pendleton A
…
Schmidt ML
ISME Communications
2026-01-01
|
#metagenomics
#phylogenomics
#microbiome
#clustering
|
|
0
|
|
Unique phylogenies and metabolic adaptations of novel lineage III and comammox Nitrospira species from deep-sea sediments.
(academic.oup.com)
|
Chen G
…
Dong H
ISME Communications
2026-01-01
|
#metagenomics
#phylogenomics
#nitrification
#metabolism
#microbiome
|
|
0
|
|
Unique characteristics of acid-tolerant comammox bacteria revealed by multi-omics analyses.
(academic.oup.com)
|
Zhang T
…
Zheng M
ISME Communications
2026-01-01
|
#metagenomics
#metatranscriptomics
#nitrification
#metabolism
#wastewater
|
|
0
|
|
Summer warming and deoxygenation shape estuarine microbial plankton across domains of life.
(academic.oup.com)
|
Dharam J
…
Santoferrara L
ISME Communications
2026-01-01
|
#microbiome
#metagenomics
#hypoxia
#metabolism
#plankton
|
|
0
|
|
Spatial heterogeneity and microbial terroir: balancing dispersal limitation and cultivar as drivers of microbial diversity in viticulture.
(academic.oup.com)
|
Griggs RG
…
Bokulich NA
ISME Communications
2026-01-01
|
#microbiome
#metagenomics
#diversity
#dispersal
|
|
0
|
|
Model substrate particles uncover dynamics of microbial communities associated with particulate organic matter decomposition in soil.
(academic.oup.com)
|
Simon E
…
Kaiser C
ISME Communications
2026-01-01
|
#microbiome
#metagenomics
#metabolism
#biofilm
#colonization
|
|
0
|
|
Revised 16S rRNA V4 hypervariable region targeting primers enhance detection of Patescibacteria and other lineages across diverse environments.
(academic.oup.com)
|
Hu H
…
Pjevac P
ISME Communications
2026-01-01
|
#sequencing
#microbiome
#metagenomics
#primers
|
|
0
|
|
Antibiotic-degrading bacteria shape resistome dynamics and horizontal gene transfer potential in soils with contrasting properties.
(academic.oup.com)
|
Mei Z
…
Wang F
ISME Communications
2026-01-01
|
#metagenomics
#amr
#conjugation
#plasmid
#microbiome
|
|
0
|
|
Root microbiome dynamics favor slow-growth strategies during Pinus seedling development.
(academic.oup.com)
|
Sun C
…
Gao C
ISME Communications
2026-01-01
|
#microbiome
#metagenomics
#colonization
#metabolism
#nitrogen
|
|
0
|
|
Behavioural phase transitions in the migratory locust, Locusta migratoria, are related to changes in the gut bacterial composition.
(academic.oup.com)
|
Kim J
…
Mori H
ISME Communications
2026-01-01
|
#microbiome
#metagenomics
#metabolism
#behavior
|
|
0
|
|
Ecology of prokaryotic DNA viruses in a highly impacted coastal lagoon revealed through comparative and temporal metagenomics.
(academic.oup.com)
|
Dominguez-Huerta G
…
Ferrera I
ISME Communications
2026-01-01
|
#metagenomics
#virome
#microbiome
#ecology
#eutrophication
|
|
0
|
|
The impact of an oral purified microbiome therapeutic on the gastrointestinal microbiome.
(nature.com)
|
Bryant JA
…
Henn MR
Nature Medicine
2026-01-01
|
#microbiome
#probiotic
#infection
#metagenomics
#dysbiosis
|
|
0
|
|
iSymBase: an integrative functional-genomic platform for ecological exploration of insect symbionts.
(academic.oup.com)
|
Wang Z
…
He K
ISME Communications
2026-01-01
|
#microbiome
#metagenomics
#symbiosis
#database
#genomics
|